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See other TSR3 CNV Assays ›
Gene Symbol
TSR3
Assay Reference Genome
Location

Chr.16:1350925 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00690717_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115939

Gene Name:

 TSR3, acp transferase ribosome maturation factor

Gene Aliases:

 C16orf42

Location:

 Chr.16:1349240-1351872 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSR3 NM_001001410.2 3 476 NP_001001410.1
BC013943.1 3 480 AAH13943.1
BC016699.1 3 480 AAH16699.1
BC017325.2 3 460 AAH17325.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain UNKL TELO2 CCDC154 GNPTG UBE2I PTX4 CLCN7 LOC105371045 IFT140 BAIAP3 C16orf91 TSR3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC652276 AXIN1 DDX11L10 MIR940 TMEM8A TPSD1 MIR3178 TPSB2 NHLRC4 RPL3L IGFALS RGS11 DNASE1L2 MIR3177 HBZ LOC107984876 MIR1225 HS3ST6 MAPK8IP3 MIR662 PGP CACNA1H LINC00235 TELO2 RNPS1 CLCN7 AMDHD2 C16orf91 RHBDL1 HBQ1 SSTR5 CCDC154 RPUSD1 FLJ42627 MIR4516 LOC729652 STUB1 MIR6767 C16orf59 SSTR5-AS1 SNRNP25 TBC1D24 LUC7L ABCA17P E4F1 CASKIN1 LMF1 GNG13 HAGH FAM173A TPSG1 BAIAP3 SOX8 TSR3 PRR35 MEIOB C1QTNF8 WDR90 BRICD5 SNHG19 MLST8 RAB11FIP3 LOC100134368 TSC2 PDIA2 SLC9A3R2 NTN3 NME3 PRSS29P TMEM204 RHBDF1 PKD1 METRN NPRL3 RNF151 MIR3677 HBM NTHL1 LOC105371184 RAB40C CHTF18 HBA1 TBL3 JMJD8 TPSAB1 ABCA3 SNORA78 NOXO1 LOC105371046 MIR6859-4 HN1L METTL26 SNORA64 RAB26 ARHGDIG ERVK13-1 GNPTG ATP6V0C NDUFB10 ECI1 EME2 SNORA10 CEMP1 SPSB3 WFIKKN1 MRPS34 KCTD5 ZNF598 FAHD1 CCNF RHOT2 LOC101929280 RPS2 GFER MIR3176 MIR6511B1 LOC105371049 IFT140 NUBP2 HAGHL MIR5587 SNORD60 MIR3180-5 UNKL MSLN LOC105371047 LMF1-AS1 PRR25 DECR2 LOC105371038 CCDC78 RPL23AP5 WASIR2 LINC00254 HBA2 FAM234A FBXL16 CRAMP1 CAPN15 MIR6768 MRPL28 MSRB1 NME4 LOC106660606 MCRIP2 NARFL LOC105371045 SNHG9 TRAF7 MIR4717 LOC107987233 POLR3K UBE2I PTX4 NPW PRSS27 WDR24 PIGQ PDPK1 LOC100287175 SYNGR3 MPG
nsv974746 Chr.16:1328043 - 1351866 on Build GRCh38 Duplication BAIAP3 TSR3
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss UNKL CACNA1H LMF1-AS1 TPSAB1 LMF1 CLCN7 PRSS29P LOC105371045 TPSG1 TPSD1 BAIAP3 SOX8 C16orf91 TSR3 TPSB2 C1QTNF8 SSTR5 CCDC154 GNPTG UBE2I LOC107984876 SSTR5-AS1
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain UNKL CACNA1H TPSAB1 PRSS29P TPSG1 TPSD1 BAIAP3 TSR3 TPSB2 C1QTNF8 SSTR5 GNPTG UBE2I SSTR5-AS1
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss UNKL CACNA1H LMF1-AS1 TPSAB1 LMF1 PRSS29P TPSG1 TPSD1 BAIAP3 SOX8 TSR3 TPSB2 C1QTNF8 SSTR5 GNPTG UBE2I SSTR5-AS1
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion UNKL CACNA1H TELO2 LOC105371047 TPSAB1 CLCN7 PRSS29P TMEM204 LOC105371045 TPSG1 TPSD1 BAIAP3 C16orf91 TSR3 TPSB2 CCDC154 GNPTG UBE2I PTX4 IFT140
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss UNKL GNPTG UBE2I TPSAB1 PRSS29P TPSD1 BAIAP3 C16orf91 TSR3

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s)


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