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See other TJP1 CNV Assays ›
Gene Symbol
TJP1
Assay Reference Genome
Location

Chr.15:29701217 on build GRCh38
Cytoband
15q13.1
Assay ID Hs00709244_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7082

Gene Name:

 tight junction protein 1

Gene Aliases:

 ZO-1

Location:

 Chr.15:29699367-29968919 on Build GRCh38

Assay Gene Location:

 Within Exon 33
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TJP1 NM_001301025.1 29 5924 NP_001287954.1
NM_001301026.1 28 5699 NP_001287955.1
NM_003257.4 28 6100 NP_003248.3
NM_175610.3 27 5860 NP_783297.2
XM_005254617.3 29 5984 XP_005254674.2
XM_005254618.3 28 5791 XP_005254675.1
XM_005254619.3 28 5804 XP_005254676.2
XM_005254620.3 28 5744 XP_005254677.2
XM_011521972.2 29 6005 XP_011520274.2
XM_017022521.1 30 6095 XP_016878010.1
XM_017022522.1 30 6056 XP_016878011.1
XM_017022523.1 30 6035 XP_016878012.1
XM_017022524.1 29 5855 XP_016878013.1
XM_017022525.1 29 5857 XP_016878014.1
XM_017022526.1 29 5842 XP_016878015.1
XM_017022527.1 29 5883 XP_016878016.1
XM_017022528.1 28 5767 XP_016878017.1
XM_017022529.1 28 5752 XP_016878018.1
XM_017022530.1 27 5551 XP_016878019.1
XM_017022531.1 30 5925 XP_016878020.1
AB370197.1 27 5664
AK302971.1
BC111712.1 AAI11713.1
BX640879.1 28 5700 CAE45936.1
CR749235.1 20 4453 CAH18091.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1040778 Chr.15:28689598 - 30515727 on Build GRCh38 Loss FAM189A1 GOLGA8J GOLGA8R NSMCE3 LOC107984752 GOLGA8T LOC100289656 GOLGA8M GOLGA6L7P LOC105370746 PDCD6IPP2 DKFZP434L187 CHRFAM7A WHAMMP2 TJP1 LOC105370751 APBA2 LOC101060569 LOC100130111 ULK4P3
nsv832945 Chr.15:29640395 - 29831518 on Build GRCh38 Gain TJP1 LOC100130111
nsv527255 Chr.15:28754022 - 30074044 on Build GRCh38 Gain FAM189A1 WHAMMP2 NSMCE3 LOC107984752 TJP1 LOC100289656 APBA2 LOC100130111 GOLGA6L7P PDCD6IPP2
esv2751526 Chr.15:28724519 - 30687025 on Build GRCh38 Loss FAM189A1 ULK4P2 GOLGA8J GOLGA8R NSMCE3 LOC107984752 LOC100289656 LOC100288637 GOLGA6L7P LOC105370746 DKFZP434L187 CHRFAM7A WHAMMP2 LOC101060569 LOC100130111 ULK4P3 ARHGAP11B LOC101927579 GOLGA8H GOLGA8T PDCD6IPP2 LOC100996413 TJP1 LOC105370751 APBA2
nsv1039798 Chr.15:28724126 - 30158154 on Build GRCh38 Gain FAM189A1 GOLGA8J NSMCE3 LOC107984752 GOLGA8T LOC100289656 GOLGA6L7P PDCD6IPP2 WHAMMP2 TJP1 APBA2 LOC100130111 ULK4P3
nsv568675 Chr.15:29035149 - 29916451 on Build GRCh38 Gain FAM189A1 NSMCE3 TJP1 APBA2 LOC100130111
nsv832944 Chr.15:29568858 - 29789854 on Build GRCh38 Gain+Loss FAM189A1 TJP1 LOC100130111

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