Name: [Hs00711858_cn] [LITAF]
Creator: Thermo Fisher Scientific
Keywords: [LITAF] Assay, [lipopolysaccharide induced TNF factor] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9516
Gene Name:	lipopolysaccharide induced TNF factor
Gene Aliases:	PIG7, SIMPLE, TP53I7
Location:	Chr.16:11547722-11636377 on Build GRCh38
Assay Gene Location:	Within Exon 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LITAF	NM_001136472.1	4	811	NP_001129944.1
	NM_001136473.1	5	909	NP_001129945.1
	NM_004862.3	4	974	NP_004853.2
	NR_024320.1	4	875
	XM_006720982.2	4	885	XP_006721045.1
	XM_006720983.3	4	1175	XP_006721046.1
	XM_006720984.3	4	927	XP_006721047.1
	XM_006720985.3	4	889	XP_006721048.1
	XM_011522754.2	6	1288	XP_011521056.1
	XM_017023896.1	4	834	XP_016879385.1
	AB034747.1	4	974	BAB32547.1
	AF010312.1	4	820	AAC39530.1
	AK095955.1	5	909
	AK130788.1	4	811
	BC000053.2	4	793
	BC008309.1	4	767	AAH08309.1
	BC016491.1	4	766	AAH16491.1
	BC039840.1	4	762	AAH39840.1
	BC046154.1	3	758	AAH46154.1
	BC096063.1			AAH96063.1
	BC096065.1			AAH96065.1
	BC096066.1			AAH96066.1
	BC101401.1			AAI01402.1
	BC101402.1			AAI01403.1
	BC101969.1			AAI01970.1
	BX537543.1	4	876	CAD97778.1
	U77396.1	4	975	AAB36550.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv524676	Chr.16:11475598 - 11701723 on Build GRCh38	Loss	SNN TXNDC11 LOC400499 LITAF
nsv457409	Chr.16:11449038 - 11728210 on Build GRCh38	Gain	LOC101927131 SNN TXNDC11 LOC400499 LITAF
nsv1160341	Chr.16:11519313 - 11553636 on Build GRCh38	Deletion	LOC400499 LITAF
esv3582010	Chr.16:11543708 - 11554324 on Build GRCh38	Loss	LITAF