Hs00716652_cn

• Gene Symbol: NUP160
• Assay Reference Genome Location: Chr.11:47779112 on build GRCh38
• Cytoband: 11p11.2

Target Gene Details

• Entrez Gene ID: 23279
• Gene Name: nucleoporin 160
• Gene Aliases: -
• Location: Chr.11:47778083-47848544 on Build GRCh38
• Assay Gene Location: Within Exon 35

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NUP160	NM_015231.2	36	4428	NP_056046.1
	NR_134636.1	36	4443
	AK304308.1	36	4214
	AL832029.1	36	4216
	AL832813.1	5	530
	BC008700.1	7	711	AAH08700.1
	BC125227.1	36	4351
	BC125228.1	36	4351
	BX647634.1	36	4228
	D83781.1			BAA12110.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv469858	Chr.11:47625963 - 47815620 on Build GRCh38	Gain	FNBP4 AGBL2 MTCH2 NUP160
dgv1111n100	Chr.11:47653918 - 48644472 on Build GRCh38	Gain	OR4X1 FNBP4 AGBL2 OR4S1 OR4B1 NUP160 MIR3161 OR4A47 OR4X2 OR4C3 PTPRJ
nsv832143	Chr.11:47679256 - 47861988 on Build GRCh38	Loss	FNBP4 AGBL2 NUP160

More Information

Additional Information:

For this assay, SNP(s) [rs56962998] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation, Validated

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

mRNA export from nucleus
tRNA export from nucleus
sister chromatid cohesion
mitotic nuclear envelope disassembly
regulation of glucose transport
protein transport
viral process
protein sumoylation
viral transcription
gene silencing by RNA
intracellular transport of virus
regulation of cellular response to heat

Function(s)

nucleocytoplasmic transporter activity
protein binding