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See other CLCN7 CNV Assays ›
Gene Symbol
CLCN7
Assay Reference Genome
Location

Chr.16:1445965 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00717742_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 1186

Gene Name:

 chloride voltage-gated channel 7

Gene Aliases:

 CLC-7, CLC7, OPTA2, OPTB4, PPP1R63

Location:

 Chr.16:1444933-1475084 on Build GRCh38

Assay Gene Location:

 Within Exon 26
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CLCN7 NM_001114331.2 24 3122 NP_001107803.1
NM_001287.5 25 3194 NP_001278.1
XM_011522354.1 25 3276 XP_011520656.1
AF224741.1 25 3122 AAF34711.1
AK056551.1 24 3063
AK096963.1 7 2119
AK122944.1 25 3710
AK128285.1 9 3108
AK130196.1 3 1026
BC004946.1 8 1454 AAH04946.1
BC006158.1 14 2029 AAH06158.1
BC012737.2 25 3121 AAH12737.1
U88844.1 3 857 AAB48530.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571161 Chr.16:1431019 - 1457987 on Build GRCh38 Gain CLCN7 CCDC154 LOC105371045
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain UNKL UBE2I PTX4 C16orf91 IFT140 GNPTG CLCN7 CCDC154 BAIAP3 TELO2 LOC105371045 TSR3
nsv471068 Chr.16:1439259 - 1460566 on Build GRCh38 Gain CLCN7 CCDC154
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NTN3 ABCA17P RAB26 RHOT2 DECR2 CACNA1H HBM LOC105371038 METTL26 PDIA2 RGS11 LOC107984876 CLCN7 E4F1 JMJD8 SSTR5-AS1 C1QTNF8 TPSAB1 MIR6511B1 MIR4717 RHBDL1 HBA2 PRR35 LOC105371184 LOC105371046 KCTD5 C16orf91 METRN RHBDF1 CCDC154 ABCA3 MIR5587 GNG13 AMDHD2 IGFALS LINC00254 NPRL3 MIR940 TSR3 MIR6859-4 BRICD5 PDPK1 WFIKKN1 LMF1-AS1 SLC9A3R2 MIR6767 SNHG9 LOC106660606 CRAMP1 NME4 MIR662 MPG MIR3178 GFER MIR1225 LINC00235 DNASE1L2 LOC105371049 MAPK8IP3 PRSS27 UNKL HS3ST6 MIR3176 PTX4 MRPS34 TMEM8A IFT140 GNPTG TRAF7 NHLRC4 MRPL28 TBL3 LOC100287175 TBC1D24 CASKIN1 RAB40C MIR3180-5 SSTR5 CEMP1 HAGHL CCDC78 MCRIP2 C16orf59 LOC105371045 SPSB3 NUBP2 LUC7L MIR3677 SNORA78 STUB1 FLJ42627 SNORA10 MEIOB HBZ TSC2 MIR3177 RAB11FIP3 WASIR2 ERVK13-1 BAIAP3 MLST8 UBE2I PKD1 MIR6768 HBQ1 FAM234A RNPS1 RNF151 PRR25 FBXL16 TPSB2 SNORD60 CCNF RPUSD1 SNRNP25 SYNGR3 NTHL1 ECI1 RPL3L ARHGDIG NDUFB10 ZNF598 PRSS29P TPSG1 FAM173A LOC652276 NPW ATP6V0C HAGH EME2 MSLN MIR4516 NOXO1 SNHG19 SNORA64 CHTF18 PGP HBA1 LOC729652 WDR90 DDX11L10 LMF1 NME3 HN1L MSRB1 TPSD1 PIGQ AXIN1 CAPN15 LOC101929280 TELO2 SOX8 NARFL LOC105371047 LOC100134368 POLR3K RPL23AP5 FAHD1 RPS2 TMEM204 WDR24 LOC107987233
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss UNKL UBE2I LMF1-AS1 LMF1 C16orf91 TPSD1 GNPTG PRSS29P TPSG1 CCDC154 CACNA1H SOX8 SSTR5 LOC107984876 TPSB2 CLCN7 BAIAP3 LOC105371045 SSTR5-AS1 TSR3 C1QTNF8 TPSAB1
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion UNKL UBE2I PTX4 C16orf91 TPSD1 IFT140 GNPTG PRSS29P TPSG1 CCDC154 CACNA1H TELO2 TPSB2 LOC105371047 CLCN7 BAIAP3 LOC105371045 TMEM204 TSR3 TPSAB1
nsv817713 Chr.16:1426464 - 1460566 on Build GRCh38 Loss CLCN7 CCDC154 LOC105371045
nsv819844 Chr.16:1401518 - 1457987 on Build GRCh38 Gain UNKL C16orf91 CLCN7 CCDC154 LOC105371045

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