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See other ATF6B CNV Assays ›
Gene Symbol
ATF6B
Assay Reference Genome
Location

Chr.6:32115552 on build GRCh38
Cytoband
6p21.32
Assay ID Hs00721148_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 1388

Gene Name:

 activating transcription factor 6 beta

Gene Aliases:

 CREB-RP, CREBL1, G13

Location:

 Chr.6:32115268-32128240 on Build GRCh38

Assay Gene Location:

 Within Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATF6B NM_001136153.1 18 2323 NP_001129625.1
NM_004381.4 18 2332 NP_004372.3
BC077075.1 18 2305 AAH77075.1
U31903.1 18 2336 AAA97438.1
U52701.1
X98054.1 18 2332 CAA66664.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss RNF5 PPT2-EGFL8 TNXB PRRT1 PPT2 GPSM3 ATF6B LOC100507547 AGER PBX2 EGFL8 MIR6833 AGPAT1 MIR6721 FKBPL NOTCH4
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss HCG23 RNF5 CYP21A1P CYP21A2 HLA-DQA1 HLA-DRB5 HLA-DQB1-AS1 C4B HLA-DRB1 HLA-DRB6 AGER PBX2 MIR6833 LOC101929163 HLA-DRA HLA-DQB2 MIR6721 C6orf10 PPT2-EGFL8 TNXB PRRT1 PPT2 GPSM3 BTNL2 HLA-DQB1 C4A ATF6B LOC100507547 EGFL8 AGPAT1 FKBPL HLA-DQA2 MIR3135B TNXA NOTCH4
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss CYP21A1P CYP21A2 HLA-DQA1 ZBTB12 DXO HLA-DQB1-AS1 C4B C2-AS1 EHMT2 AGER PBX2 MIR1236 HLA-DRA SNORD48 C6orf10 PPT2-EGFL8 PPT2 GPSM3 SNORD52 HSPA1A CFB HLA-DQB1 NEU1 EGFL8 TNXA NOTCH4 HCG23 RNF5 HSPA1B HLA-DRB5 HLA-DRB1 HLA-DRB6 C2 MIR6833 LOC101929163 SLC44A4 MIR6721 TNXB SKIV2L PRRT1 BTNL2 STK19 C4A ATF6B LOC100507547 C6orf48 NELFE AGPAT1 FKBPL
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss RNF5 CYP21A1P CYP21A2 DXO C4B C2-AS1 AGER PBX2 C2 MIR1236 MIR6833 MIR6721 PPT2-EGFL8 TNXB SKIV2L PRRT1 PPT2 GPSM3 STK19 CFB C4A ATF6B LOC100507547 EGFL8 NELFE AGPAT1 FKBPL TNXA NOTCH4
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion CYP21A1P CYP21A2 LY6G5C LY6G6F ZBTB12 GPANK1 DXO C4B LOC100287329 C2-AS1 EHMT2 AGER PBX2 SNORD117 MIR1236 NCR3 ABHD16A LSM2 HLA-DRA SNORD48 C6orf10 SNORA38 PPT2-EGFL8 HCG26 PPT2 LTA CSNK2B GPSM3 BAG6 SNORD52 HSPA1A CFB LOC102725068 PRRC2A NEU1 LST1 VWA7 EGFL8 MCCD1 TNXA NOTCH4 CLIC1 HCG23 HCP5 RNF5 MICB HSPA1B TNF C6orf25 DDX39B MIR4646 HLA-DRB5 SNORD84 HSPA1L HLA-DRB1 HLA-DRB6 NFKBIL1 ATP6V1G2 C2 MIR6833 DDX39B-AS1 LOC101929163 SLC44A4 LTB MIR6721 AIF1 C6orf47 TNXB SKIV2L PRRT1 LY6G6D MSH5 MIR6832 BTNL2 STK19 MSH5-SAPCD1 APOM C4A ATF6B LOC100507547 LY6G5B LY6G6E C6orf48 VARS SAPCD1-AS1 DDAH2 NELFE LY6G6C AGPAT1 FKBPL SAPCD1 ATP6V1G2-DDX39B
nsv1028506 Chr.6:32105835 - 32139754 on Build GRCh38 Gain ATF6B TNXB FKBPL
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion CYP21A1P HLA-DOB LY6G5C LY6G6F ZBTB12 GPANK1 DXO PSMB9 LOC100287329 C2-AS1 AGER MIR1236 NCR3 ABHD16A LSM2 HLA-DQB2 C6orf10 SNORA38 MIR5004 PPT2-EGFL8 HCG26 PPT2 LTA CSNK2B HCG24 BAG6 SNORD52 HSPA1A CFB LOC102725068 PRRC2A NEU1 HCG25 LOC100294145 HLA-DQA2 MIR3135B NOTCH4 HCP5 RNF5 MICB MIR6873 C6orf25 RGL2 HLA-DRB5 PHF1 ATP6V1G2 C2 MIR6833 LOC101929163 AIF1 VPS52 HLA-DMA PRRT1 LY6G6D WDR46 BRD2 MSH5 ZBTB22 STK19 MSH5-SAPCD1 APOM C4A HLA-DPB1 ATF6B LOC100507547 C6orf48 ZBTB9 SAPCD1-AS1 NELFE SAPCD1 SLC39A7 RPS18 KIFC1 CYP21A2 HLA-DQA1 HLA-DPB2 HLA-DPA1 HLA-DQB1-AS1 C4B PPP1R2P1 RXRB HSD17B8 TAP2 EHMT2 PBX2 SNORD117 HLA-DRA SNORD48 GPSM3 B3GALT4 PFDN6 RING1 HLA-DQB1 HLA-DOA LST1 TAP1 VWA7 EGFL8 MCCD1 TNXA COL11A2 CLIC1 HCG23 HSPA1B TNF MIR6834 DDX39B MIR4646 SNORD84 HSPA1L HLA-DRB1 DAXX HLA-DRB6 MIR219A1 NFKBIL1 DDX39B-AS1 CUTA SLC44A4 LTB MIR6721 C6orf47 TNXB SKIV2L MIR6832 SYNGAP1 BTNL2 PSMB8 TAPBP PSMB8-AS1 LY6G5B LY6G6E VARS DDAH2 LY6G6C AGPAT1 HLA-DMB FKBPL ATP6V1G2-DDX39B
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss RNF5 PPT2-EGFL8 TNXB PRRT1 PPT2 GPSM3 ATF6B LOC100507547 AGER PBX2 EGFL8 MIR6833 AGPAT1 MIR6721 FKBPL NOTCH4
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion CYP21A1P HLA-DOB LY6G5C LY6G6F ZBTB12 GPANK1 DXO PSMB9 LOC100287329 C2-AS1 AGER MIR1236 NCR3 ABHD16A LSM2 HLA-DQB2 C6orf10 SNORA38 MIR5004 PPT2-EGFL8 HCG26 PPT2 LTA CSNK2B HCG24 BAG6 SNORD52 HSPA1A CFB LOC102725068 PRRC2A NEU1 HCG25 LOC100294145 HLA-DQA2 MIR3135B NOTCH4 HCP5 RNF5 MICB MIR6873 C6orf25 RGL2 HLA-DRB5 PHF1 ATP6V1G2 C2 MIR6833 LOC101929163 AIF1 VPS52 HLA-DMA PRRT1 LY6G6D WDR46 BRD2 MSH5 ZBTB22 STK19 MSH5-SAPCD1 APOM C4A HLA-DPB1 ATF6B LOC100507547 C6orf48 ZBTB9 SAPCD1-AS1 NELFE SAPCD1 SLC39A7 RPS18 KIFC1 CYP21A2 HLA-DQA1 HLA-DPB2 HLA-DPA1 HLA-DQB1-AS1 C4B PPP1R2P1 RXRB HSD17B8 TAP2 EHMT2 PBX2 SNORD117 HLA-DRA SNORD48 GPSM3 B3GALT4 PFDN6 RING1 HLA-DQB1 HLA-DOA LST1 TAP1 VWA7 EGFL8 MCCD1 TNXA COL11A2 CLIC1 HCG23 HSPA1B TNF MIR6834 DDX39B MIR4646 SNORD84 HSPA1L HLA-DRB1 DAXX HLA-DRB6 MIR219A1 NFKBIL1 DDX39B-AS1 CUTA SLC44A4 LTB MIR6721 C6orf47 TNXB SKIV2L MIR6832 SYNGAP1 BTNL2 PSMB8 TAPBP PSMB8-AS1 LY6G5B LY6G6E VARS DDAH2 LY6G6C AGPAT1 HLA-DMB FKBPL ATP6V1G2-DDX39B
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss CYP21A1P CYP21A2 LY6G5C LY6G6F ZBTB12 GPANK1 DXO C4B LOC100287329 C2-AS1 EHMT2 AGER PBX2 SNORD117 MIR1236 NCR3 ABHD16A LSM2 HLA-DRA SNORD48 C6orf10 SNORA38 PPT2-EGFL8 HCG26 PPT2 LTA CSNK2B GPSM3 BAG6 SNORD52 HSPA1A CFB LOC102725068 PRRC2A NEU1 LST1 MIR6891 VWA7 EGFL8 MICA MCCD1 TNXA NOTCH4 CLIC1 HCG23 HCP5 RNF5 MICB HSPA1B TNF C6orf25 DDX39B MIR4646 SNORD84 HSPA1L NFKBIL1 ATP6V1G2 C2 MIR6833 DDX39B-AS1 LOC101929163 SLC44A4 LTB MIR6721 AIF1 C6orf47 TNXB SKIV2L PRRT1 LY6G6D MSH5 MIR6832 BTNL2 STK19 MSH5-SAPCD1 APOM C4A ATF6B LOC100507547 LY6G5B HLA-B LY6G6E C6orf48 VARS SAPCD1-AS1 DDAH2 NELFE LY6G6C AGPAT1 FKBPL SAPCD1 ATP6V1G2-DDX39B

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