Hs00749750_cn

• Gene Symbol: LRRC61
• Assay Reference Genome Location: Chr.7:150329963 on build GRCh38
• Cytoband: 7q36.1

Target Gene Details

• Entrez Gene ID: 65999
• Gene Name: leucine rich repeat containing 61
• Gene Aliases: HSPC295
• Location: Chr.7:150322639-150338156 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LRRC61	NM_001142928.1			NP_001136400.1
	NM_023942.2			NP_076431.1
	XM_006716095.2			XP_006716158.1
	AK025869.1
	AK055954.1
	AK098061.1
	BC001354.1			AAH01354.1

Target Gene Details

• Entrez Gene ID: 113763
• Gene Name: ZBED6 C-terminal like
• Gene Aliases: C7orf29
• Location: Chr.7:150329849-150332721 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZBED6CL	NM_138434.2	1	115	NP_612443.1
	AL832660.1	1	177

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1034409	Chr.7:150147550 - 150749983 on Build GRCh38	Gain	GIMAP7 LOC107986860 GIMAP1 LINC00996 GIMAP5 GIMAP1-GIMAP5 LRRC61 ACTR3C LOC728743 GIMAP8 ZBED6CL GIMAP2 GIMAP6 RARRES2 ZNF775 GIMAP4 REPIN1
nsv1015582	Chr.7:150270897 - 150588016 on Build GRCh38	Gain	LOC728743 GIMAP8 ZBED6CL RARRES2 GIMAP7 LOC107986860 LINC00996 ZNF775 GIMAP4 LRRC61 REPIN1 ACTR3C
nsv508490	Chr.7:150308979 - 150354152 on Build GRCh38	Deletion	ZBED6CL RARRES2 LRRC61 ACTR3C
nsv951645	Chr.7:150326212 - 150342411 on Build GRCh38	Deletion	ZBED6CL RARRES2 LRRC61
nsv608990	Chr.7:150264185 - 151010400 on Build GRCh38	Gain	GIMAP7 LOC107986860 GIMAP1 LINC00996 GIMAP5 KCNH2 GIMAP1-GIMAP5 NOS3 LRRC61 ACTR3C LOC728743 GIMAP8 ZBED6CL GIMAP2 GIMAP6 RARRES2 TMEM176B AOC1 LOC105375566 ZNF775 GIMAP4 REPIN1 TMEM176A
nsv521407	Chr.7:150323206 - 150421502 on Build GRCh38	Loss	LOC728743 ZBED6CL RARRES2 ZNF775 LRRC61 REPIN1 ACTR3C

More Information

Additional Information:

For this assay, SNP(s) [rs113800845] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcription factor activity, sequence-specific DNA binding