Hs00752769_cn

• Gene Symbol: TRAF1
• Assay Reference Genome Location: Chr.9:120905176 on build GRCh38
• Cytoband: 9q33.2

Target Gene Details

• Entrez Gene ID: 7185
• Gene Name: TNF receptor associated factor 1
• Gene Aliases: EBI6, MGC:10353
• Location: Chr.9:120902393-120929173 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRAF1	NM_001190945.1	9	1520	NP_001177874.1
	NM_001190947.1	6	932	NP_001177876.1
	NM_005658.4	8	1667	NP_005649.1
	AK090468.1	8	1668	BAC03449.1
	AK295959.1	6	932
	AK315476.1	9	1548
	AL832989.1	8	3540	CAH56343.1
	BC024145.2	7	1173	AAH24145.1
	BT019408.1	7	1095	AAV38215.1
	U19261.1	7	1170	AAA62309.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2759713	Chr.9:120885919 - 121080717 on Build GRCh38	Loss	CNTRL TRAF1 PHF19 C5
nsv6700	Chr.9:120896969 - 120930014 on Build GRCh38	Insertion	TRAF1 PHF19
nsv1051370	Chr.9:120810573 - 120906638 on Build GRCh38	Gain	PSMD5-AS1 TRAF1 PSMD5 PHF19

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

protein complex assembly
apoptotic process
signal transduction
regulation of tumor necrosis factor-mediated signaling pathway
positive regulation of NF-kappaB transcription factor activity
regulation of extrinsic apoptotic signaling pathway

Function(s)

tumor necrosis factor receptor binding
protein binding
zinc ion binding
ubiquitin protein ligase binding
thioesterase binding
identical protein binding