Hs00766045_cn

• Gene Symbol: TRIM46
• Assay Reference Genome Location: Chr.1:155184766 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 80128
• Gene Name: tripartite motif containing 46
• Gene Aliases: GENEY, TRIFIC
• Location: Chr.1:155173714-155184971 on Build GRCh38
• Assay Gene Location: Within Exon 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRIM46	NM_001256599.1	10	3046	NP_001243528.1
	NM_001256600.1	11	2990	NP_001243529.1
	NM_001256601.1	10	2877	NP_001243530.1
	NM_001282378.1	9	2774	NP_001269307.1
	NM_025058.4	10	3036	NP_079334.3
	NR_046327.1	11	3074
	NR_046329.1	12	3133
	XM_011510002.1	11	2979	XP_011508304.1
	XM_017002393.1	11	3150	XP_016857882.1
	AK090504.1	2	1643
	AK096158.1	10	2924
	AK128139.1	12	3133	BAC87293.1
	DB326530.1	1	206

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527682	Chr.1:155177242 - 155227671 on Build GRCh38	Gain	MTX1 TRIM46 MUC1 MIR92B THBS3 GBAP1
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	KRTCAP2 MTX1 TRIM46 GBA MUC1 MIR92B THBS3 FAM189B SCAMP3 GBAP1
nsv1010146	Chr.1:155146620 - 155231273 on Build GRCh38	Gain	KRTCAP2 MTX1 TRIM46 MUC1 MIR92B THBS3 GBAP1
nsv2988	Chr.1:155182130 - 155219701 on Build GRCh38	Insertion	MTX1 TRIM46 MUC1 MIR92B THBS3 GBAP1
nsv547961	Chr.1:155109822 - 155225189 on Build GRCh38	Loss	KRTCAP2 EFNA1 MTX1 TRIM46 DPM3 MUC1 MIR92B SLC50A1 THBS3 GBAP1
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	DPM3 FDPS MIR92B HCN3 SLC50A1 LOC105371451 PKLR GBAP1 KRTCAP2 EFNA1 RUSC1-AS1 MTX1 TRIM46 GBA MUC1 RUSC1 THBS3 FAM189B ASH1L SCAMP3 CLK2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s)

zinc ion binding