Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 4927 |
Gene Name: | nucleoporin 88 |
Gene Aliases: |
- |
Location: |
Chr.17:5384833-5419739 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| NUP88 | NM_001320653.1 | 17 | 3607 | NP_001307582.1 |
| NM_002532.5 | 17 | 3559 | NP_002523.2 | |
| AW089098.1 | 1 | 135 | ||
| BQ937933.1 | 1 | 666 |
Target Gene Details
Entrez Gene ID: | 9135 |
Gene Name: | rabaptin, RAB GTPase binding effector protein 1 |
Gene Aliases: |
RAB5EP, RABPT5 |
Location: |
Chr.17:5282263-5386340 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| RABEP1 | NM_001083585.2 | 17 | 4453 | NP_001077054.1 |
| NM_001291581.1 | 17 | 4423 | NP_001278510.1 | |
| NM_004703.5 | 18 | 4552 | NP_004694.2 | |
| XM_011524060.1 | 19 | 4618 | XP_011522362.1 | |
| XM_017025294.1 | 17 | 4145 | XP_016880783.1 | |
| XM_017025295.1 | 16 | 4079 | XP_016880784.1 | |
| AL157499.1 | 1 | 1288 | ||
| BC041700.1 | 18 | 4518 | AAH41700.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv819082 | Chr.17:5384670 - 5384946 on Build GRCh38 | Loss |
 NUP88
RABEP1
|
| nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain |
SPAG7
C17orf107
ZNF594
LOC101559451
CXCL16
LOC100130950
PFN1
ARRB2
ZFP3
VMO1
LOC107984973
USP6
SLC52A1
SCIMP
TM4SF5
ZNF232
NUP88
ENO3
MED11
PSMB6
GP1BA
RPAIN
CAMTA2
PELP1
ZMYND15
LOC102724009
MINK1
SLC25A11
CHRNE
MIR6865
RNF167
LOC400568
INCA1
LOC101927979
GLTPD2
DHX33
KIF1C
LOC101928000
SMTNL2
MIR6864
RABEP1
ALOX15
PLD2
C1QBP
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top