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See other THNSL2 CNV Assays ›
Gene Symbol
THNSL2
Assay Reference Genome
Location

Chr.2:88186264 on build GRCh38
Cytoband
2p11.2
Assay ID Hs00779949_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 55258

Gene Name:

 threonine synthase like 2

Gene Aliases:

 SOFAT, THS2, TSH2

Location:

 Chr.2:88170295-88186637 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
THNSL2 NM_001244676.1 9 1792 NP_001231605.1
NM_001244678.1 6 1188 NP_001231607.1
NM_018271.4 8 1608 NP_060741.3
XM_005264400.4 9 1720 XP_005264457.1
XM_005264401.4 9 1689 XP_005264458.1
XM_005264403.4 7 3357 XP_005264460.1
XM_005264405.4 7 3322 XP_005264462.1
XM_006712041.3 8 3474 XP_006712104.1
XM_006712044.3 5 3082 XP_006712107.1
XM_011532954.2 7 3314 XP_011531256.1
XM_011532955.2 8 1454 XP_011531257.1
AI313402.1
AK001778.1 8 1228 BAA91904.1
AK092823.1 1 2490
AK095303.1 8 3288
AK289486.1 7 1288
AK315831.1
AL832746.1 5 988
BC035315.1 8 1439 AAH35315.1
BC047758.2 5 1027 AAH47758.2
BC064423.1 9 1689 AAH64423.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv61n16 Chr.2:87343737 - 90254660 on Build GRCh38 Deletion LOC101928371 MIR4436A MIR4435-1 IGKV1D-8 ANKRD36BP2 RGPD2 RPIA IGKV2-29 IGKV1-5 TEX37 FOXI3 KRCC1 IGKV3-20 LOC730268 SMYD1 LOC101928403 LOC101927050 IGK LOC107985911 IGKV1D-13 THNSL2 IGKV3D-15 EIF2AK3 IGKV2-24 LINC00152 PLGLB2 IGKC FABP1 MIR4780 IGKV2-26
dgv6947n54 Chr.2:87815738 - 88850700 on Build GRCh38 Gain LOC101928371 SMYD1 LOC101928403 MIR4436A ANKRD36BP2 RGPD2 THNSL2 RPIA EIF2AK3 TEX37 FOXI3 FABP1 KRCC1 MIR4780
nsv1072005 Chr.2:87360367 - 90256528 on Build GRCh38 Deletion LOC101928371 MIR4436A MIR4435-1 IGKV1D-8 ANKRD36BP2 RGPD2 RPIA IGKV2-29 IGKV1-5 TEX37 FOXI3 KRCC1 IGKV3-20 LOC730268 SMYD1 LOC101928403 LOC101927050 IGK LOC107985911 IGKV1D-13 THNSL2 IGKV3D-15 EIF2AK3 IGKV2-24 LINC00152 PLGLB2 IGKC FABP1 MIR4780 IGKV2-26
nsv834289 Chr.2:88083076 - 88251327 on Build GRCh38 Gain SMYD1 FABP1 THNSL2
nsv1130752 Chr.2:87360364 - 90256525 on Build GRCh38 Deletion LOC101928371 MIR4436A MIR4435-1 IGKV1D-8 ANKRD36BP2 RGPD2 RPIA IGKV2-29 IGKV1-5 TEX37 FOXI3 KRCC1 IGKV3-20 LOC730268 SMYD1 LOC101928403 LOC101927050 IGK LOC107985911 IGKV1D-13 THNSL2 IGKV3D-15 EIF2AK3 IGKV2-24 LINC00152 PLGLB2 IGKC FABP1 MIR4780 IGKV2-26
nsv582384 Chr.2:87987149 - 88773214 on Build GRCh38 Loss LOC101928371 SMYD1 LOC101928403 ANKRD36BP2 RGPD2 THNSL2 RPIA EIF2AK3 TEX37 FOXI3 FABP1 KRCC1 MIR4780
nsv582386 Chr.2:88035188 - 89208087 on Build GRCh38 Loss LOC101928371 SMYD1 LOC101928403 MIR4436A IGK ANKRD36BP2 THNSL2 RPIA EIF2AK3 IGKV2-24 IGKV1-5 TEX37 IGKC FOXI3 FABP1 KRCC1 IGKV3-20 MIR4780 IGKV2-26
nsv582383 Chr.2:87915816 - 88527080 on Build GRCh38 Gain SMYD1 TEX37 FOXI3 FABP1 RGPD2 THNSL2 KRCC1 MIR4780

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