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See other CHRNE CNV Assays ›
Gene Symbol
CHRNE
Assay Reference Genome
Location

Chr.17:4898832 on build GRCh38
Cytoband
17p13.2
Assay ID Hs00781367_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1145

Gene Name:

 cholinergic receptor nicotinic epsilon subunit

Gene Aliases:

 ACHRE, CMS1D, CMS1E, CMS2A, CMS4A, CMS4B, CMS4C, FCCMS, SCCMS

Location:

 Chr.17:4897769-4905019 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHRNE NM_000080.3 12 1397 NP_000071.1
XM_017024115.1 12 1416 XP_016879604.1
X66403.1 12 1397 CAA47030.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833350 Chr.17:4884713 - 5060776 on Build GRCh38 Loss SLC25A11 C17orf107 PFN1 CAMTA2 MINK1 RNF167 LOC102724009 GP1BA KIF1C SLC52A1 SPAG7 INCA1 MIR6865 MIR6864 LOC101927979 ENO3 CHRNE
esv3572365 Chr.17:4874864 - 4942141 on Build GRCh38 Gain SLC25A11 C17orf107 MINK1 RNF167 GP1BA CHRNE
nsv833349 Chr.17:4853631 - 4991300 on Build GRCh38 Loss SLC25A11 C17orf107 PFN1 CAMTA2 MINK1 RNF167 GP1BA SPAG7 INCA1 MIR6865 MIR6864 LOC101927979 ENO3 CHRNE
nsv574275 Chr.17:4875192 - 4946479 on Build GRCh38 Gain SLC25A11 C17orf107 PFN1 MINK1 RNF167 GP1BA CHRNE
nsv833347 Chr.17:4785297 - 4955981 on Build GRCh38 Loss SLC25A11 C17orf107 PFN1 MINK1 RNF167 PLD2 VMO1 GP1BA LOC107984973 GLTPD2 ENO3 CHRNE PSMB6
dgv3088n100 Chr.17:4868317 - 4942562 on Build GRCh38 Gain SLC25A11 C17orf107 MINK1 RNF167 GP1BA CHRNE
nsv509647 Chr.17:4865132 - 4918672 on Build GRCh38 Insertion C17orf107 MINK1 CHRNE
nsv574273 Chr.17:4585589 - 5460332 on Build GRCh38 Gain SLC25A11 C17orf107 CXCL16 PFN1 TM4SF5 ZNF232 CAMTA2 USP6 NUP88 MINK1 RNF167 PLD2 LOC100130950 DHX33 ALOX15 SMTNL2 LOC101928000 ZNF594 RABEP1 ZFP3 LOC101559451 INCA1 LOC101927979 C1QBP MED11 ZMYND15 LOC102724009 VMO1 GP1BA LOC107984973 KIF1C SCIMP SLC52A1 GLTPD2 SPAG7 MIR6865 ARRB2 MIR6864 RPAIN LOC400568 PELP1 ENO3 CHRNE PSMB6

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