Genomic Map
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Target Gene Details
Entrez Gene ID: | 51690 |
Gene Name: | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated |
Gene Aliases: |
YNL147W |
Location: |
Chr.19:2321521-2328615 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 1 - Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LSM7 | NM_016199.2 | NP_057283.1 | ||
| XM_017026869.1 | XP_016882358.1 | |||
| BI553911.1 |
Target Gene Details
Entrez Gene ID: | 56928 |
Gene Name: | signal peptide peptidase like 2B |
Gene Aliases: |
IMP-4, IMP4, PSH4, PSL1 |
Location: |
Chr.19:2328571-2355102 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SPPL2B | XM_011528138.2 | XP_011526440.1 | ||
| XM_017027016.1 | XP_016882505.1 | |||
| AK309122.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1160562 | Chr.19:2328434 - 2460264 on Build GRCh38 | Deletion |
 LSM7
LMNB2
SPPL2B
LOC101928602
MIR7108
TMPRSS9
TIMM13
|
| esv3643422 | Chr.19:2314254 - 2337163 on Build GRCh38 | Gain |
LSM7
SPPL2B
|
| dgv6218n54 | Chr.19:2221793 - 2336009 on Build GRCh38 | Loss |
MIR1227
LSM7
C19orf35
MIR4321
AMH
PLEKHJ1
JSRP1
OAZ1
MIR6789
LINGO3
SF3A2
SPPL2B
DOT1L
LOC105372239
|
| nsv953944 | Chr.19:2283702 - 2525802 on Build GRCh38 | Deletion |
LSM7
LMNB2
SPPL2B
LOC101929097
LOC101928602
GNG7
GADD45B
MIR7108
LINGO3
TMPRSS9
TIMM13
|
| nsv833707 | Chr.19:2187092 - 2372223 on Build GRCh38 | Loss |
MIR1227
LSM7
C19orf35
MIR4321
AMH
PLEKHJ1
JSRP1
OAZ1
MIR6789
LINGO3
SF3A2
SPPL2B
DOT1L
LOC105372239
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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