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See other SPATC1 CNV Assays ›
Gene Symbol
SPATC1
Assay Reference Genome
Location

Chr.8:144040627 on build GRCh38
Cytoband
8q24.3
Assay ID Hs00797188_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 375686

Gene Name:

 spermatogenesis and centriole associated 1

Gene Aliases:

 SPATA15

Location:

 Chr.8:144010992-144047114 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATC1 NM_001134374.1 3 928 NP_001127846.1
NM_198572.2 3 928 NP_940974.2
XM_011517021.1 3 928 XP_011515323.1
XM_011517022.2 3 1214 XP_011515324.1
XM_011517023.2 3 2232 XP_011515325.1
XM_011517024.2 4 1453 XP_011515326.1
XM_011517025.2 3 1888 XP_011515327.1
XM_017013399.1 4 747 XP_016868888.1
AB092352.1 3 916 BAD08232.1
AK301710.1 3 916
BC050390.1 3 918 AAH50390.1
BC053547.1 3 903 AAH53547.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss SMPD5 SPATC1 EXOSC4 GPAA1 WDR97 MROH1 MIR6846 CYC1 OPLAH SHARPIN MIR6847 HGH1 MAF1
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss MIR6893 SPATC1 TONSL LOC101928902 RECQL4 PLEC HSF1 MROH1 BOP1 MIR6846 MIR6849 MIR7112 PARP10 GPT OPLAH SHARPIN MIR6847 ADCK5 MIR939 FOXH1 PPP1R16A LRRC14 MAF1 SMPD5 EXOSC4 GPAA1 GRINA SCX WDR97 MIR6848 FBXL6 CYC1 TONSL-AS1 TMEM249 LOC101928953 DGAT1 VPS28 KIFC2 MFSD3 HGH1 CPSF1 SLC52A2 SLC39A4 SCRT1 MIR1234 MIR661 CYHR1
nsv6446 Chr.8:144012529 - 144050050 on Build GRCh38 Insertion SMPD5 SPATC1
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss MIR6893 SPATC1 TONSL LOC101928902 RECQL4 PLEC HSF1 MROH1 BOP1 MIR6846 MIR6849 MIR7112 PARP10 GPT OPLAH SHARPIN MIR6847 ADCK5 MIR939 FOXH1 PPP1R16A LRRC14 MAF1 SMPD5 EXOSC4 GPAA1 GRINA SCX WDR97 MIR6848 FBXL6 CYC1 TONSL-AS1 TMEM249 LOC101928953 DGAT1 VPS28 KIFC2 MFSD3 HGH1 CPSF1 SLC52A2 SLC39A4 SCRT1 MIR1234 MIR661 CYHR1
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss SMPD5 SPATC1 EXOSC4 GPAA1 GRINA WDR97 PLEC MIR6846 PARP10 CYC1 OPLAH SHARPIN MIR6847 MAF1
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss SMPD5 SPATC1 EXOSC4 GPAA1 GRINA WDR97 PLEC MROH1 MIR6846 PARP10 CYC1 OPLAH SHARPIN EPPK1 MIR6847 HGH1 MAF1 MIR661
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion SMPD5 SPATC1 EXOSC4 GPAA1 GRINA WDR97 PLEC MIR6846 PARP10 CYC1 OPLAH SHARPIN EPPK1 MIR6847 MAF1 MIR661
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion SMPD5 SPATC1 EXOSC4 GRINA PLEC MIR6845 MIR6846 PARP10 OPLAH EPPK1 MIR6847 NRBP2 LOC642574 PUF60 SCRIB MIR937 MIR661
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain SMPD5 OPLAH SPATC1 EXOSC4 GPAA1 GRINA MIR6847 PLEC MIR6846 PARP10 CYC1 MIR661
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain SMPD5 SPATC1 EXOSC4 GPAA1 GRINA WDR97 PLEC MIR6846 PARP10 CYC1 OPLAH SHARPIN MIR6847 MAF1 MIR661
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss SMPD5 OPLAH SPATC1 EXOSC4 GPAA1 GRINA MIR6847 PLEC MIR6846 PARP10 MIR661

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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