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Gene Symbol
TLDC1
Assay Reference Genome
Location

Chr.16:84495725 on build GRCh38
Cytoband
16q24.1
Assay ID Hs00804085_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57707

Gene Name:

 TBC/LysM-associated domain containing 1

Gene Aliases:

 KIAA1609

Location:

 Chr.16:84476355-84504752 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TLDC1 NM_020947.3 NP_065998.3
XM_005256074.3 XP_005256131.1
XM_005256075.2 XP_005256132.1
XM_006721240.2 XP_006721303.1
XM_011523248.2 XP_011521550.1
XM_011523249.2 XP_011521551.1
XM_017023510.1 XP_016878999.1
XM_017023511.1 XP_016879000.1
XM_017023512.1 XP_016879001.1
AK291237.1
AK300132.1
AK310887.1
BC023251.1 AAH23251.1
BC060844.1 AAH60844.1
BI767086.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1065249 Chr.16:84435765 - 84556540 on Build GRCh38 Gain ATP2C2 LOC105371374 TLDC1
nsv1061004 Chr.16:84405376 - 84561748 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
esv3892928 Chr.16:84339110 - 84524557 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
nsv573425 Chr.16:84298994 - 84575953 on Build GRCh38 Loss ATP2C2 WFDC1 LOC105371374 TLDC1 COTL1
nsv1064308 Chr.16:84461124 - 84592674 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1 COTL1
esv3639429 Chr.16:84472177 - 84518552 on Build GRCh38 Gain TLDC1
dgv3057n100 Chr.16:84378422 - 84500091 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain LOC101928557 GINS2 DNAAF1 TAF1C FOXF1 USP10 LOC440390 LOC146513 MIR6774 MIR5093 LINC00311 C16orf74 FENDRR FOXC2 FOXC2-AS1 CRISPLD2 ZDHHC7 FOXL1 WFDC1 ADAD2 TLDC1 LOC101928614 LOC102724344 LINC01081 GSE1 EMC8 IRF8 LOC105371374 KCNG4 FAM92B LOC400548 MTHFSD COTL1 MIR1910 KIAA0513 LINC00917 LOC101928474 LINC01082 ATP2C2 LOC105376777 COX4I1 FLJ30679 KLHL36
nsv573454 Chr.16:84468700 - 84512067 on Build GRCh38 Loss TLDC1
nsv833311 Chr.16:84489192 - 84663857 on Build GRCh38 Loss TLDC1 COTL1 KLHL36
nsv1059640 Chr.16:84338790 - 84543759 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
dgv5262n54 Chr.16:84381903 - 84583279 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1 COTL1
nsv573430 Chr.16:84387654 - 84501190 on Build GRCh38 Loss ATP2C2 LOC105371374 TLDC1
esv3892929 Chr.16:84492337 - 84506132 on Build GRCh38 Loss TLDC1
nsv1058049 Chr.16:84481312 - 84543759 on Build GRCh38 Loss TLDC1
dgv549e214 Chr.16:84434443 - 84555604 on Build GRCh38 Gain ATP2C2 LOC105371374 TLDC1

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More Information


Additional Information:

For this assay, SNP(s) [rs146308201] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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