Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 11155 |
Gene Name: | LIM domain binding 3 |
Gene Aliases: |
CMD1C, CMH24, CMPD3, CYPHER, LDB3Z1, LDB3Z4, LVNC3, MFM4, ORACLE, PDLIM6, ZASP |
Location: |
Chr.10:86664785-86736072 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LDB3 | XM_011539185.2 | 1 | 1080 | XP_011537487.1 |
| XM_017015606.1 | 1 | 1080 | XP_016871095.1 | |
| XM_017015608.1 | 1 | 1080 | XP_016871097.1 |
Target Gene Details
Entrez Gene ID: | 94233 |
Gene Name: | opsin 4 |
Gene Aliases: |
MOP |
Location: |
Chr.10:86653495-86666460 on Build GRCh38 |
Assay Gene Location: | Within Exon 11 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| OPN4 | NM_001030015.2 | 11 | 1810 | NP_001025186.1 |
| NM_033282.3 | 10 | 1777 | NP_150598.1 | |
| XM_017016957.1 | 11 | 2607 | XP_016872446.1 | |
| BC113558.1 | 10 | 1606 | ||
| BC143688.1 | 11 | 1639 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv1320n54 | Chr.10:86653016 - 86668546 on Build GRCh38 | Gain |
 OPN4
LDB3
|
| nsv1049754 | Chr.10:86604960 - 86699322 on Build GRCh38 | Gain |
OPN4
LDB3
|
| nsv524269 | Chr.10:86654455 - 86680809 on Build GRCh38 | Loss |
OPN4
LDB3
|
| dgv116n27 | Chr.10:86653555 - 86682683 on Build GRCh38 | Loss |
OPN4
LDB3
|
| dgv948n100 | Chr.10:86646619 - 86714855 on Build GRCh38 | Gain |
OPN4
LDB3
|
| nsv551783 | Chr.10:86630480 - 86680809 on Build GRCh38 | Loss |
OPN4
LDB3
|
| nsv470968 | Chr.10:86647213 - 86709830 on Build GRCh38 | Loss |
OPN4
LDB3
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top