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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89644732 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00816750_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 6 2102 NP_001076783.1
NM_002768.4 7 2122 NP_002759.2
NR_046418.2 7 2290
AI356110.1 1 307
AI362697.1 1 307
AK302055.1
BC010000.2 2 1710 AAH10000.2
D38554.1 7 1990 BAA07557.1
U58048.1 7 2179 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss ZNF276 CDK10 TCF25 GAS8 SPATA33 LOC107984817 DBNDD1 FANCA MC1R LOC105371419 DEF8 VPS9D1 GAS8-AS1 AFG3L1P VPS9D1-AS1 SPATA2L CENPBD1 TUBB3 DPEP1 SPIRE2 CHMP1A
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ZNF276 TCF25 GAS8 SPATA33 RPL13 LOC107984817 LOC100287036 SNORD68 MC1R LOC105371414 DEF8 VPS9D1 VPS9D1-AS1 PRDM7 CPNE7 TUBB3 SPG7 ZNF778 SPIRE2 CDK10 URAHP DBNDD1 FANCA TUBB8P7 FAM157C LOC105371419 LOC101927817 GAS8-AS1 AFG3L1P SPATA2L CENPBD1 ANKRD11 DPEP1 CHMP1A
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain CDK10 SPATA33 SPATA2L DPEP1 CHMP1A
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SNORD68 LOC101927817 SPATA33 RPL13 ANKRD11 CPNE7 SPG7 DPEP1 CHMP1A
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SPATA33 CDT1 LOC107987238 LOC100287036 SNORD68 MC1R LOC105371414 SNAI3-AS1 TUBB3 LOC400558 ZNF778 SPIRE2 APRT LOC100129697 CTU2 ACSF3 CBFA2T3 MIR4722 FAM157C LOC105371419 LOC101927817 LINC00304 GALNS GAS8-AS1 AFG3L1P DPEP1 CHMP1A ZNF276 SLC22A31 TCF25 LOC105371409 GAS8 RPL13 LOC107984817 CDH15 RNF166 MVD DEF8 VPS9D1 VPS9D1-AS1 SNAI3 TRAPPC2L PRDM7 CPNE7 SPG7 IL17C CDK10 URAHP LOC339059 LOC101927793 DBNDD1 FANCA TUBB8P7 CYBA LOC100289580 SPATA2L CENPBD1 ANKRD11 PABPN1L PIEZO1
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion ZNF276 CDK10 SPATA33 RPL13 FANCA SNORD68 VPS9D1 VPS9D1-AS1 SPATA2L CPNE7 SPG7 DPEP1 CHMP1A
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain SNORD68 SPATA33 RPL13 CPNE7 SPG7 DPEP1 CHMP1A

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