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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49701614 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00823970_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 11 - Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AB208884.1 BAD92121.1
AF357970.1 AAL99615.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss PRRG2 NOSIP BCL2L12 SCAF1 PRMT1 MIR5088 CPT1C PRR12 RRAS IRF3 ADM5
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss PRRG2 NOSIP BCL2L12 SCAF1 PRMT1 MIR5088 CPT1C PRR12 RRAS IRF3 ADM5
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss FCGRT FLJ26850 DKKL1 C19orf73 AKT1S1 PTH2 SNORD32A TRPM4 SCAF1 PRMT1 FUZ SNAR-A10 RPL13A LOC105372430 SLC6A16 PTOV1 PPP1R15A AP2A1 CCDC114 SNAR-A12 SPHK2 LIN7B SNAR-D MED25 SIGLEC11 SNAR-A2 CGB1 SNORD34 PLA2G4C-AS1 SNAR-C4 PNKP MIR6798 FUT1 SNAR-B1 CPT1C CGB5 ELSPBP1 RCN3 MIR4749 FGF21 GYS1 SNAR-A1 PRR12 RASIP1 CARD8 LOC100287477 CCDC155 PLEKHA4 SNAR-A13 ALDH16A1 HRC MIR4324 SNAR-A7 CGB7 SYNGR4 PLA2G4C SNORD35B ZNF114 LMTK3 LOC101059948 LOC101928295 CGB2 RRAS ZNF473 LHB SEC1P IZUMO1 MIR6800 SNAR-C3 CGB8 MIR4751 MIR5088 MIR150 CA11 NTF4 CD37 ATF5 GFY NUCB1-AS1 TBC1D17 NTN5 VRK3 NUCB1 PRRG2 SNAR-A5 NOSIP SIGLEC16 LOC105447645 IL4I1 SPACA4 GRWD1 KCNJ14 SNAR-A9 BAX BSPH1 SNAR-C2 EMP3 GRIN2D FLT3LG CARD8-AS1 SNAR-A14 SULT2B1 TSKS SNAR-A6 SNAR-G1 MIR6799 HSD17B14 SNAR-B2 C19orf68 SNRNP70 DBP NUP62 FUT2 SLC17A7 SNAR-A8 SNORD33 CGB3 SNORD35A PTOV1-AS2 SNAR-A4 SNAR-A11 SNAR-G2 IRF3 ADM5 BCAT2 CABP5 KCNA7 FAM83E DHDH SNAR-A3 TMEM143 SNAR-C1 CYTH2 PIH1D1 TEAD2 KDELR1 PPFIA3 SNAR-C5 MAMSTR TULP2 RUVBL2 FTL BCL2L12 LIG1 MIR4750 RPL18 PTOV1-AS1 RPS11
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain BCL2L12 SCAF1 PRMT1 MIR5088 CPT1C PRR12 RRAS IRF3 ADM5
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion NUP62 PNKP MIR6800 MIR4751 MIR5088 CPT1C PTOV1-AS2 ATF5 IRF3 TBC1D17 ADM5 AKT1S1 PRRG2 NOSIP MIR4749 SCAF1 PRMT1 PRR12 FUZ IL4I1 PTOV1 AP2A1 MED25 TSKS BCL2L12 MIR6799 MIR4750 RRAS PTOV1-AS1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain PRRG2 NOSIP BCL2L12 SCAF1 PRMT1 MIR5088 CPT1C PRR12 RRAS IRF3 ADM5
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion MIR6800 FCGRT SNORD33 MIR5088 CPT1C MIR150 SNORD35A IRF3 ADM5 RCN3 PRRG2 NOSIP SNORD32A SCAF1 PRMT1 PRR12 FUZ RPL13A AP2A1 MED25 SNORD35B TSKS BCL2L12 MIR6799 RRAS PTOV1-AS1 SNORD34 RPS11

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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