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See other CHRNE CNV Assays ›
Gene Symbol
CHRNE
Assay Reference Genome
Location

Chr.17:4899591 on build GRCh38
Cytoband
17p13.2
Assay ID Hs00826156_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1145

Gene Name:

 cholinergic receptor nicotinic epsilon subunit

Gene Aliases:

 ACHRE, CMS1D, CMS1E, CMS2A, CMS4A, CMS4B, CMS4C, FCCMS, SCCMS

Location:

 Chr.17:4897769-4905019 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHRNE NM_000080.3 NP_000071.1
XM_017024115.1 XP_016879604.1
X66403.1 CAA47030.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833350 Chr.17:4884713 - 5060776 on Build GRCh38 Loss C17orf107 MIR6865 CHRNE SLC25A11 ENO3 INCA1 GP1BA MINK1 CAMTA2 PFN1 LOC101927979 RNF167 MIR6864 KIF1C LOC102724009 SLC52A1 SPAG7
esv3572365 Chr.17:4874864 - 4942141 on Build GRCh38 Gain GP1BA C17orf107 MINK1 RNF167 CHRNE SLC25A11
nsv833349 Chr.17:4853631 - 4991300 on Build GRCh38 Loss C17orf107 MIR6865 CHRNE SLC25A11 ENO3 INCA1 GP1BA MINK1 CAMTA2 PFN1 LOC101927979 RNF167 MIR6864 SPAG7
nsv574275 Chr.17:4875192 - 4946479 on Build GRCh38 Gain GP1BA C17orf107 MINK1 PFN1 RNF167 CHRNE SLC25A11
nsv833347 Chr.17:4785297 - 4955981 on Build GRCh38 Loss C17orf107 PLD2 GLTPD2 VMO1 CHRNE SLC25A11 ENO3 PSMB6 GP1BA MINK1 PFN1 RNF167 LOC107984973
dgv3088n100 Chr.17:4868317 - 4942562 on Build GRCh38 Gain GP1BA C17orf107 MINK1 RNF167 CHRNE SLC25A11
nsv509647 Chr.17:4865132 - 4918672 on Build GRCh38 Insertion C17orf107 MINK1 CHRNE
nsv574273 Chr.17:4585589 - 5460332 on Build GRCh38 Gain LOC101928000 C17orf107 PLD2 GLTPD2 MIR6865 ZMYND15 VMO1 LOC100130950 CHRNE SLC25A11 ZFP3 SMTNL2 INCA1 LOC101559451 ZNF594 PSMB6 CXCL16 NUP88 GP1BA CAMTA2 PFN1 LOC101927979 MIR6864 C1QBP SCIMP TM4SF5 ALOX15 LOC107984973 SPAG7 ZNF232 ENO3 RABEP1 USP6 MED11 LOC400568 RPAIN MINK1 RNF167 DHX33 ARRB2 KIF1C PELP1 LOC102724009 SLC52A1

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