Hs00852845_cn

• Gene Symbol: MTA2
• Assay Reference Genome Location: Chr.11:62593684 on build GRCh38
• Cytoband: 11q12.3

Target Gene Details

• Entrez Gene ID: 9219
• Gene Name: metastasis associated 1 family member 2
• Gene Aliases: MTA1L1, PID
• Location: Chr.11:62593203-62601840 on Build GRCh38
• Assay Gene Location: Within Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MTA2	NM_004739.3	18	2588	NP_004730.2
	XM_017018561.1	18	2440	XP_016874050.1
	AB016591.1	18	2521	BAA36707.1
	AI380395.1
	BC053650.1	18	2406	AAH53650.1
	BQ574987.1
	CR749481.1	16	2109	CAH18309.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3584599	Chr.11:62495270 - 62630578 on Build GRCh38	Gain	GANAB EML3 MTA2 ROM1 B3GAT3 EEF1G TUT1 MIR6747 AHNAK
nsv832180	Chr.11:62434133 - 62597356 on Build GRCh38	Loss	MTA2 EEF1G TUT1 MIR6747 AHNAK
nsv825939	Chr.11:62558611 - 62643105 on Build GRCh38	Gain	GANAB EML3 MTA2 ROM1 B3GAT3 EEF1G TUT1 MIR6747
nsv832182	Chr.11:62528103 - 62695376 on Build GRCh38	Gain+Loss	INTS5 EML3 B3GAT3 LBHD1 AHNAK C11orf98 UBXN1 UQCC3 METTL12 BSCL2 LRRN4CL SNORA57 GANAB MTA2 ROM1 EEF1G TUT1 HNRNPUL2-BSCL2 MIR6747
nsv555174	Chr.11:62566624 - 62729047 on Build GRCh38	Gain	INTS5 EML3 B3GAT3 LBHD1 C11orf98 TTC9C UBXN1 GNG3 UQCC3 METTL12 BSCL2 HNRNPUL2 LRRN4CL SNORA57 GANAB MTA2 ROM1 EEF1G TUT1 HNRNPUL2-BSCL2 MIR6747

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

homeodomain transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA methylation
chromatin assembly or disassembly
regulation of fibroblast migration
histone deacetylation
ATP-dependent chromatin remodeling
positive regulation of transcription from RNA polymerase II promoter
regulation of signal transduction by p53 class mediator

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity, transcription factor binding
RNA polymerase II transcription factor binding
RNA polymerase II repressing transcription factor binding
transcription factor activity, sequence-specific DNA binding
histone deacetylase activity
protein binding
zinc ion binding
nucleosomal DNA binding
histone deacetylase binding