Hs00854101_cn

• Gene Symbol: HOXC13
• Assay Reference Genome Location: Chr.12:53945371 on build GRCh38
• Cytoband: 12q13.13

Target Gene Details

• Entrez Gene ID: 3229
• Gene Name: homeobox C13
• Gene Aliases: ECTD9, HOX3, HOX3G
• Location: Chr.12:53938792-53946544 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HOXC13	NM_017410.2	2	1223	NP_059106.2
	AF255676.1	2	1223	AAF67760.1
	AF263466.2	2	1180	AAF73439.1
	AK024027.1	2	705	BAB14786.1
	BC090850.1	2	1192	AAH90850.1
	BU158600.1	2	512

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv826379	Chr.12:53935085 - 54056069 on Build GRCh38	Gain	HOXC4 HOXC-AS3 HOTAIR HOXC-AS2 LOC107984512 HOXC13-AS MIR196A2 MIR615 HOXC13 HOXC9 HOXC8 HOXC5 HOXC10 HOXC11 HOXC6 HOXC12 HOXC-AS1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

hair follicle development
transcription from RNA polymerase II promoter
anatomical structure morphogenesis
anterior/posterior pattern specification
nail development
tongue morphogenesis
positive regulation of transcription from RNA polymerase II promoter

Function(s)

transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
chromatin binding
protein binding
sequence-specific DNA binding