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See other AMDHD2 CNV Assays ›
Gene Symbol
AMDHD2
Assay Reference Genome
Location

Chr.16:2530416 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00867619_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51005

Gene Name:

 amidohydrolase domain containing 2

Gene Aliases:

 CGI-14

Location:

 Chr.16:2520351-2531414 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AMDHD2 NM_001145815.1 11 1539 NP_001139287.1
XM_017023262.1 11 2191 XP_016878751.1
XM_017023263.1 9 2179 XP_016878752.1
XM_017023264.1 10 2122 XP_016878753.1
XM_017023265.1 10 2089 XP_016878754.1
XM_017023266.1 10 2137 XP_016878755.1
XM_017023267.1 9 2133 XP_016878756.1
AK296877.1 11 1511
AK300747.1 10 1355

Target Gene Details

Entrez Gene ID:

 752014

Gene Name:

 cementum protein 1

Gene Aliases:

 CP-23, CP23

Location:

 Chr.16:2530035-2531408 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CEMP1 NM_001048212.3 1 993 NP_001041677.1
AY584596.1 1 993 AAT01221.1
BC146925.1 1 943
BC146926.1 1 943

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ABCA3 MIR3177 PDIA2 RGS11 WASIR2 TMEM204 LOC105371049 NARFL RAB26 LOC105371038 LOC107987233 RNF151 CLCN7 HBQ1 TPSD1 HBM CCNF SPSB3 AMDHD2 TBL3 HAGH LOC105371046 NTHL1 SNORA78 MEIOB RPL23AP5 MSRB1 CCDC78 UBE2I TRAF7 SNRNP25 GNG13 TMEM8A ECI1 E4F1 DNASE1L2 KCTD5 RPL3L ZNF598 FLJ42627 TPSG1 LOC100287175 MIR4516 TSR3 HAGHL RNPS1 BAIAP3 UNKL LOC107984876 MIR3178 SNORA10 FAHD1 CAPN15 SNHG19 HBA1 MIR6511B1 FAM234A CHTF18 TELO2 TPSAB1 HN1L SSTR5 PRSS29P RHBDF1 MIR940 C16orf91 NDUFB10 MIR6768 SNHG9 MIR6767 RAB40C RHBDL1 SOX8 MAPK8IP3 LMF1-AS1 DDX11L10 CACNA1H LOC105371047 NOXO1 ERVK13-1 BRICD5 NME4 IGFALS FBXL16 LOC101929280 SYNGR3 CCDC154 WDR24 RHOT2 HBA2 PRR25 METRN LOC105371045 PRSS27 MIR4717 HBZ PRR35 SNORA64 MSLN NME3 WDR90 MIR6859-4 PIGQ MIR3180-5 CRAMP1 SLC9A3R2 FAM173A MPG LOC729652 ARHGDIG LOC106660606 TBC1D24 PTX4 NPW NUBP2 TSC2 LOC100134368 TPSB2 GFER LMF1 IFT140 PKD1 MLST8 RPS2 C16orf59 C1QTNF8 MCRIP2 CASKIN1 AXIN1 SNORD60 MIR1225 LINC00235 SSTR5-AS1 MRPS34 HS3ST6 NTN3 METTL26 ATP6V0C LUC7L PDPK1 MIR3677 STUB1 LOC105371184 LOC652276 MIR5587 PGP JMJD8 RPUSD1 WFIKKN1 EME2 GNPTG MIR3176 LINC00254 DECR2 MRPL28 MIR662 NPRL3 ABCA17P NHLRC4 RAB11FIP3 CEMP1 POLR3K
esv2760067 Chr.16:2486824 - 2820535 on Build GRCh38 Gain+Loss AMDHD2 ATP6V0C ERVK13-1 TCEB2 SRRM2-AS1 PDPK1 LOC652276 PRSS33 MIR3178 SRRM2 KCTD5 PRSS21 PRSS41 TBC1D24 FLJ42627 CEMP1 PRSS27
nsv833122 Chr.16:2501717 - 2663937 on Build GRCh38 Loss AMDHD2 ATP6V0C ERVK13-1 PDPK1 LOC652276 TBC1D24 FLJ42627 MIR3178 CEMP1
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain ABCA3 MIR4516 RNPS1 LOC105371049 BRICD5 RAB26 TSC2 MIR3178 PKD1 MLST8 C16orf59 CASKIN1 SNORD60 SNHG19 MIR1225 MIR4717 CCNF AMDHD2 MIR6511B1 NTN3 ATP6V0C PDPK1 MIR3677 LOC652276 PGP MIR3180-5 MIR940 MIR6768 TRAF7 MIR6767 ECI1 E4F1 DNASE1L2 LOC729652 LOC106660606 ABCA17P TBC1D24 CEMP1

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