Hs00887493_cn

• Gene Symbol: ZNF350
• Assay Reference Genome Location: Chr.19:51964749 on build GRCh38
• Cytoband: 19q13.41

Target Gene Details

• Entrez Gene ID: 59348
• Gene Name: zinc finger protein 350
• Gene Aliases: ZBRK1, ZFQR
• Location: Chr.19:51964340-51986876 on Build GRCh38
• Assay Gene Location: Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZNF350	NM_021632.3	5	1932	NP_067645.3
	XM_011527196.1	5	1976	XP_011525498.1
	XM_017027094.1	6	2088	XP_016882583.1
	XM_017027095.1	6	2249	XP_016882584.1
	XM_017027096.1	6	2109	XP_016882585.1
	XM_017027097.1	6	2122	XP_016882586.1
	XM_017027098.1	6	2209	XP_016882587.1
	XM_017027099.1	7	2232	XP_016882588.1
	XM_017027100.1	5	2091	XP_016882589.1
	XM_017027101.1	6	2075	XP_016882590.1
	XM_017027102.1	6	2121	XP_016882591.1
	XM_017027103.1	6	2209	XP_016882592.1
	XM_017027104.1	6	2213	XP_016882593.1
	AF295096.1	4	1887	AAG17439.1
	AF309561.1	5	1921	AAG25714.1
	AK023467.1	5	1932	BAB14583.1
	BC009921.2	4	1872	AAH09921.1
	BM674621.1	1	427

Target Gene Details

• Entrez Gene ID: 101669766
• Gene Name: ZNF350 antisense RNA 1
• Gene Aliases: HCCAT3, uc002pyc
• Location: Chr.19:51949134-51981367 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZNF350-AS1	NR_103847.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv580006	Chr.19:51946390 - 52016355 on Build GRCh38	Loss	ZNF350 ZNF615 ZNF350-AS1 ZNF614
nsv833872	Chr.19:51928534 - 52115771 on Build GRCh38	Loss	ZNF350 ZNF432 ZNF613 ZNF841 ZNF615 ZNF616 ZNF350-AS1 ZNF614
nsv525259	Chr.19:51964569 - 51968311 on Build GRCh38	Loss	ZNF350 ZNF350-AS1
dgv425n27	Chr.19:51784199 - 52104512 on Build GRCh38	Gain	ZNF350 ZNF432 LOC100419706 ZNF613 ZNF649-AS1 ZNF841 ZNF615 ZNF577 ZNF649 FPR3 ZNF350-AS1 ZNF614
dgv1067e212	Chr.19:51768056 - 52117340 on Build GRCh38	Gain	ZNF350 ZNF841 ZNF649 FPR3 ZNF350-AS1 FPR2 ZNF614 ZNF432 LOC100419706 ZNF613 ZNF649-AS1 ZNF615 ZNF616 ZNF577
dgv143e55	Chr.19:51724663 - 52127682 on Build GRCh38	Gain	ZNF350 FPR1 ZNF841 ZNF649 FPR3 ZNF350-AS1 FPR2 ZNF614 ZNF432 LOC100419706 ZNF613 ZNF649-AS1 ZNF615 ZNF616 ZNF577
esv2758767	Chr.19:51488642 - 52101372 on Build GRCh38	Gain+Loss	HAS1 LINC01530 ZNF649 FPR3 SIGLEC14 ZNF350-AS1 LOC339352 ZNF614 ZNF432 LOC100419706 ZNF577 SIGLEC6 CEACAM18 ZNF350 MIRLET7E FPR1 MIR125A ZNF841 ZNF175 MIR99B SIGLEC5 SPACA6 SIGLEC12 SPACA6P-AS FPR2 ZNF613 ZNF649-AS1 ZNF615
nsv580001	Chr.19:51798407 - 52013985 on Build GRCh38	Gain	ZNF350 LOC100419706 ZNF613 ZNF649-AS1 ZNF615 ZNF577 ZNF649 FPR3 ZNF350-AS1 ZNF614
dgv3626n100	Chr.19:51746647 - 52125358 on Build GRCh38	Gain	ZNF350 FPR1 ZNF841 ZNF649 FPR3 ZNF350-AS1 FPR2 ZNF614 ZNF432 LOC100419706 ZNF613 ZNF649-AS1 ZNF615 ZNF616 ZNF577
dgv6523n54	Chr.19:51767689 - 52118391 on Build GRCh38	Gain	ZNF350 ZNF841 ZNF649 FPR3 ZNF350-AS1 FPR2 ZNF614 ZNF432 LOC100419706 ZNF613 ZNF649-AS1 ZNF615 ZNF616 ZNF577

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
transcription, DNA-templated
regulation of transcription, DNA-templated
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
protein binding
metal ion binding