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See other MIR1-1HG CNV Assays ›
Gene Symbol
MIR1-1HG
Assay Reference Genome
Location

Chr.20:62553553 on build GRCh38
Cytoband
20q13.33
Assay ID Hs00892069_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
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Assay Details

Target Gene Details

Entrez Gene ID:

 128826

Gene Name:

 MIR1-1 host gene

Gene Aliases:

 C20orf166, MIR133A2HG, dJ353C17.1

Location:

 Chr.20:62550453-62570764 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MIR1-1HG NM_001302812.1 3 294 NP_001289741.1
NM_178463.3 2 675 NP_848558.1
AK056985.1 2 691
BC110595.2 2 350 AAI10596.1
DA896197.1 3 291

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4344n100 Chr.20:62436472 - 62569333 on Build GRCh38 Gain MIR133A2 C20orf166-AS1 MIR1-1HG GATA5 MIR1-1
esv2422398 Chr.20:62207833 - 62674040 on Build GRCh38 Duplication LAMA5-AS1 RBBP8NL SLCO4A1-AS1 LAMA5 ADRM1 RPS21 MIR133A2 SLCO4A1 HRH3 C20orf166-AS1 LOC105369209 MIR1-1HG OSBPL2 GATA5 CABLES2 MIR1-1 MIR4758
nsv586496 Chr.20:62332390 - 62812195 on Build GRCh38 Gain LAMA5-AS1 RBBP8NL SLCO4A1-AS1 LAMA5 LOC107985428 LOC107987285 MRGBP RPS21 MIR133A2 LINC00659 SLCO4A1 NTSR1 C20orf166-AS1 MIR1-1HG OGFR OGFR-AS1 GATA5 CABLES2 MIR1-1 MIR4758
nsv474672 Chr.20:62553577 - 62553577 on Build GRCh38 Novel Sequence Insertion MIR1-1HG
nsv953302 Chr.20:62345345 - 62831248 on Build GRCh38 Deletion LAMA5-AS1 RBBP8NL SLCO4A1-AS1 LAMA5 LOC107985428 LOC107987285 MRGBP RPS21 MIR133A2 LINC00659 SLCO4A1 NTSR1 C20orf166-AS1 MIR1-1HG OGFR OGFR-AS1 GATA5 CABLES2 MIR1-1 COL9A3
nsv459068 Chr.20:62444168 - 62577283 on Build GRCh38 Gain MIR133A2 C20orf166-AS1 MIR1-1HG GATA5 MIR1-1
dgv4343n100 Chr.20:62391262 - 62569333 on Build GRCh38 Gain RBBP8NL MIR133A2 C20orf166-AS1 MIR1-1HG GATA5 CABLES2 MIR1-1
nsv470556 Chr.20:62212004 - 62577283 on Build GRCh38 Loss LAMA5-AS1 RBBP8NL LAMA5 ADRM1 RPS21 MIR133A2 HRH3 C20orf166-AS1 LOC105369209 MIR1-1HG OSBPL2 GATA5 CABLES2 MIR1-1 MIR4758

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More Information


Additional Information:

For this assay, SNP(s) [rs77911650] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

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