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See other TRIM46 CNV Assays ›
Gene Symbol
TRIM46
Assay Reference Genome
Location

Chr.1:155184136 on build GRCh38
Cytoband
1q22
Assay ID Hs00899038_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 80128

Gene Name:

 tripartite motif containing 46

Gene Aliases:

 GENEY, TRIFIC

Location:

 Chr.1:155173714-155184971 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRIM46 NM_001256599.1 10 2416 NP_001243528.1
NM_001256600.1 11 2360 NP_001243529.1
NM_001256601.1 10 2247 NP_001243530.1
NM_001282378.1 9 2144 NP_001269307.1
NM_025058.4 10 2406 NP_079334.3
NR_046327.1 11 2444
NR_046329.1 12 2503
XM_011510002.1 11 2349 XP_011508304.1
XM_017002393.1 11 2520 XP_016857882.1
AK090504.1 2 1013
AK096158.1 10 2294
AK128139.1 12 2503 BAC87293.1
AK296300.1 11 2356
AK297318.1 9 2052
AK309699.1 10 2247
AY251386.1 10 2226 AAP51206.1
BC126372.1 11 2361

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527682 Chr.1:155177242 - 155227671 on Build GRCh38 Gain GBAP1 THBS3 MIR92B MTX1 TRIM46 MUC1
nsv470741 Chr.1:155142784 - 155260340 on Build GRCh38 Loss GBA GBAP1 KRTCAP2 THBS3 FAM189B MIR92B MTX1 SCAMP3 TRIM46 MUC1
nsv8447 Chr.1:155172153 - 155184461 on Build GRCh38 Gain KRTCAP2 TRIM46
nsv1010146 Chr.1:155146620 - 155231273 on Build GRCh38 Gain GBAP1 KRTCAP2 THBS3 MIR92B MTX1 TRIM46 MUC1
nsv2988 Chr.1:155182130 - 155219701 on Build GRCh38 Insertion GBAP1 THBS3 MIR92B MTX1 TRIM46 MUC1
nsv547961 Chr.1:155109822 - 155225189 on Build GRCh38 Loss GBAP1 KRTCAP2 THBS3 EFNA1 MIR92B SLC50A1 MTX1 DPM3 TRIM46 MUC1
dgv3n68 Chr.1:155122502 - 155343618 on Build GRCh38 Loss LOC105371451 GBA CLK2 KRTCAP2 THBS3 RUSC1-AS1 RUSC1 SLC50A1 FDPS MTX1 TRIM46 MUC1 ASH1L PKLR GBAP1 FAM189B EFNA1 MIR92B HCN3 DPM3 SCAMP3

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)


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