Hs00901476_cn

• Gene Symbol: DDX28
• Assay Reference Genome Location: Chr.16:68022831 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 55794
• Gene Name: DEAD-box helicase 28
• Gene Aliases: MDDX28
• Location: Chr.16:68021274-68023867 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DDX28	NM_018380.3	1	1037	NP_060850.2
	AK002144.1	1	612	BAA92106.1
	BC024273.1	1	379	AAH24273.1
	DA159162.1	1	395

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2666619	Chr.16:68003989 - 68045407 on Build GRCh38	Deletion	DDX28 DUS2 LOC100131303
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	FBXL8 THAP11 NUTF2 LRRC29 PSMB10 GFOD2 DPEP2 LRRC36 EDC4 SLC12A4 NOL3 LOC107984813 DUS2 CARMIL2 DDX28 ENKD1 PLEKHG4 PSKH1 C16orf86 CENPT LOC105369155 EXOC3L1 FAM65A AGRP ATP6V0D1 TRADD E2F4 CTRL ELMO3 KCTD19 RANBP10 LOC100131303 LOC100505942 FHOD1 LCAT TPPP3 ACD PARD6A HSD11B2 MIR328 DPEP3 TMEM208 CTCF SLC9A5 NRN1L ZDHHC1 HSF4 TSNAXIP1 KIAA0895L
esv3638897	Chr.16:68004075 - 68045657 on Build GRCh38	Loss	DDX28 DUS2 LOC100131303
esv3638899	Chr.16:68008886 - 68035332 on Build GRCh38	Loss	DDX28 DUS2 LOC100131303
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	FBXL8 THAP11 NUTF2 LRRC29 PSMB10 GFOD2 DPEP2 LRRC36 EDC4 SLC12A4 NOL3 LOC107984813 DUS2 CARMIL2 DDX28 ENKD1 PLEKHG4 PSKH1 C16orf86 CENPT LOC105369155 EXOC3L1 FAM65A AGRP ATP6V0D1 TRADD E2F4 CTRL ELMO3 KCTD19 RANBP10 LOC100131303 LOC100505942 C16orf70 FHOD1 B3GNT9 LCAT TPPP3 ACD PARD6A HSD11B2 MIR328 DPEP3 TMEM208 CTCF SLC9A5 NRN1L ZDHHC1 HSF4 TSNAXIP1 KIAA0895L

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

RNA secondary structure unwinding
mitochondrial large ribosomal subunit assembly

Function(s)

ATP-dependent RNA helicase activity
ATP binding
rRNA binding
poly(A) RNA binding