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See other PLEKHG5 CNV Assays ›
Gene Symbol
PLEKHG5
Assay Reference Genome
Location

Chr.1:6474025 on build GRCh38
Cytoband
1p36.31
Assay ID Hs00905751_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57449

Gene Name:

 pleckstrin homology and RhoGEF domain containing G5

Gene Aliases:

 CMTRIC, DSMA4, GEF720, Syx, Tech

Location:

 Chr.1:6466092-6520061 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 14 - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHG5 NM_001042663.1 NP_001036128.1
NM_001042664.1 NP_001036129.1
NM_001042665.1 NP_001036130.1
NM_001265592.1 NP_001252521.1
NM_001265593.1 NP_001252522.1
NM_001265594.1 NP_001252523.1
NM_020631.4 NP_065682.2
NM_198681.3 NP_941374.2
AB018263.2
AB097001.1 BAC77354.1
AK024676.1
AK096347.1
AK125550.1
AK131074.1 BAC85124.1
AK294875.1
AK299523.1
AK301239.1
BC015231.1 AAH15231.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1009548 Chr.1:6342976 - 6517352 on Build GRCh38 Loss TNFRSF25 ACOT7 PLEKHG5 ESPN HES2 MIR4252
dgv80n54 Chr.1:6396412 - 6512115 on Build GRCh38 Loss TNFRSF25 PLEKHG5 ESPN HES2 MIR4252
nsv545267 Chr.1:6466264 - 6504096 on Build GRCh38 Loss PLEKHG5
nsv954048 Chr.1:6414241 - 6500740 on Build GRCh38 Deletion TNFRSF25 PLEKHG5 ESPN HES2 MIR4252
nsv470690 Chr.1:6434339 - 6512115 on Build GRCh38 Gain TNFRSF25 PLEKHG5 ESPN
nsv7880 Chr.1:6417968 - 6611914 on Build GRCh38 Gain+Loss TAS1R1 TNFRSF25 NOL9 ZBTB48 PLEKHG5 ESPN HES2 KLHL21 MIR4252
nsv545264 Chr.1:6457119 - 6492439 on Build GRCh38 Loss TNFRSF25 PLEKHG5 ESPN
nsv545240 Chr.1:6351154 - 6512115 on Build GRCh38 Loss TNFRSF25 ACOT7 PLEKHG5 ESPN HES2 MIR4252
nsv470691 Chr.1:6460251 - 6517705 on Build GRCh38 Loss TNFRSF25 PLEKHG5 ESPN
nsv462061 Chr.1:6463370 - 6520836 on Build GRCh38 Loss TNFRSF25 PLEKHG5
nsv831536 Chr.1:6429326 - 6605343 on Build GRCh38 Loss TAS1R1 TNFRSF25 NOL9 ZBTB48 PLEKHG5 ESPN KLHL21 MIR4252
nsv508836 Chr.1:6406896 - 6501029 on Build GRCh38 Insertion TNFRSF25 PLEKHG5 ESPN HES2 MIR4252

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More Information


Additional Information:

For this assay, SNP(s) [rs76386795] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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