Hs00911758_cn

• Gene Symbol: TRIM46
• Assay Reference Genome Location: Chr.1:155184324 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 80128
• Gene Name: tripartite motif containing 46
• Gene Aliases: GENEY, TRIFIC
• Location: Chr.1:155173714-155184971 on Build GRCh38
• Assay Gene Location: Within Exon 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRIM46	NM_001256599.1	10	2604	NP_001243528.1
	NM_001256600.1	11	2548	NP_001243529.1
	NM_001256601.1	10	2435	NP_001243530.1
	NM_001282378.1	9	2332	NP_001269307.1
	NM_025058.4	10	2594	NP_079334.3
	NR_046327.1	11	2632
	NR_046329.1	12	2691
	XM_011510002.1	11	2537	XP_011508304.1
	XM_017002393.1	11	2708	XP_016857882.1
	AK090504.1	2	1201
	AK096158.1	10	2482
	AK128139.1	12	2691	BAC87293.1
	AK297318.1	9	2240

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527682	Chr.1:155177242 - 155227671 on Build GRCh38	Gain	TRIM46 MUC1 GBAP1 THBS3 MIR92B MTX1
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	TRIM46 MUC1 GBA KRTCAP2 GBAP1 THBS3 MIR92B SCAMP3 MTX1 FAM189B
nsv8447	Chr.1:155172153 - 155184461 on Build GRCh38	Gain	TRIM46 KRTCAP2
nsv1010146	Chr.1:155146620 - 155231273 on Build GRCh38	Gain	TRIM46 MUC1 KRTCAP2 GBAP1 THBS3 MIR92B MTX1
nsv2988	Chr.1:155182130 - 155219701 on Build GRCh38	Insertion	TRIM46 MUC1 GBAP1 THBS3 MIR92B MTX1
nsv547961	Chr.1:155109822 - 155225189 on Build GRCh38	Loss	TRIM46 MUC1 KRTCAP2 EFNA1 GBAP1 DPM3 THBS3 MIR92B MTX1 SLC50A1
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	TRIM46 MUC1 KRTCAP2 GBAP1 THBS3 MIR92B LOC105371451 RUSC1 HCN3 RUSC1-AS1 GBA FDPS CLK2 EFNA1 DPM3 ASH1L SCAMP3 MTX1 FAM189B SLC50A1 PKLR

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s)

zinc ion binding