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See other TAF1C CNV Assays ›
Gene Symbol
TAF1C
Assay Reference Genome
Location

Chr.16:84179585 on build GRCh38
Cytoband
16q24.1
Assay ID Hs00922208_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9013

Gene Name:

 TATA-box binding protein associated factor, RNA polymerase I subunit C

Gene Aliases:

 MGC:39976, SL1, TAFI110, TAFI95

Location:

 Chr.16:84177847-84187070 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAF1C NM_001243156.1 15 2130 NP_001230085.1
NM_001243157.1 12 1764 NP_001230086.1
NM_001243158.1 11 1625 NP_001230087.1
NM_001243159.1 14 2097 NP_001230088.1
NM_001243160.1 12 1942 NP_001230089.1
NM_005679.3 14 2208 NP_005670.3
NM_139353.2 15 1966 NP_647610.2
XM_005256226.3 14 2131 XP_005256283.1
XM_005256227.3 14 2042 XP_005256284.1
XM_006721325.3 15 2223 XP_006721388.1
XM_006721326.3 16 2145 XP_006721389.1
XM_017023845.1 15 2053 XP_016879334.1
XM_017023846.1 13 1992 XP_016879335.1
XM_017023847.1 15 1964 XP_016879336.1
XM_017023848.1 9 1815 XP_016879337.1
AB209594.1 13 2906 BAD92831.1
AK097031.1 12 1911
AK299060.1 12 1727
AK299347.1 15 2101
AK304261.1 14 2079
AK315982.1 11 1612
BC028131.1 15 1945 AAH28131.1
L39059.1 14 2150 AAA62861.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639413 Chr.16:84172318 - 84253359 on Build GRCh38 Loss DNAAF1 TAF1C KCNG4 ADAD2
nsv833309 Chr.16:84076867 - 84248591 on Build GRCh38 Loss DNAAF1 HSDL1 MBTPS1 TAF1C KCNG4 ADAD2 LOC729887
nsv1065790 Chr.16:83830329 - 84243597 on Build GRCh38 Loss DNAAF1 MLYCD SLC38A8 NECAB2 OSGIN1 HSDL1 MBTPS1 LOC105371371 TAF1C KCNG4 ADAD2 LOC729887
esv2761930 Chr.16:84007420 - 84312461 on Build GRCh38 Gain DNAAF1 WFDC1 SLC38A8 HSDL1 MBTPS1 LOC105376777 TAF1C KCNG4 ADAD2 LOC729887
nsv523437 Chr.16:84176132 - 84196770 on Build GRCh38 Loss DNAAF1 TAF1C ADAD2
nsv573423 Chr.16:84179104 - 84190716 on Build GRCh38 Loss TAF1C
esv3639414 Chr.16:84176251 - 84352273 on Build GRCh38 Loss DNAAF1 WFDC1 LOC105376777 TAF1C KCNG4 ADAD2
esv3639412 Chr.16:84170074 - 84221406 on Build GRCh38 Loss DNAAF1 TAF1C KCNG4 ADAD2
nsv573422 Chr.16:84178502 - 84180359 on Build GRCh38 Loss DNAAF1 TAF1C
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain LINC01081 MIR1910 LINC00311 FLJ30679 USP10 MIR5093 TLDC1 LOC101928557 LINC00917 ADAD2 KLHL36 FOXL1 COX4I1 EMC8 FOXC2-AS1 ATP2C2 FOXF1 DNAAF1 CRISPLD2 LINC01082 FENDRR LOC105371374 LOC146513 LOC440390 GINS2 FOXC2 LOC102724344 KCNG4 COTL1 GSE1 C16orf74 WFDC1 ZDHHC7 IRF8 FAM92B LOC101928474 LOC105376777 MTHFSD MIR6774 KIAA0513 TAF1C LOC101928614 LOC400548
nsv1059227 Chr.16:84029323 - 84233403 on Build GRCh38 Loss DNAAF1 SLC38A8 HSDL1 MBTPS1 TAF1C KCNG4 ADAD2 LOC729887

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