Hs00928069_cn

• Gene Symbol: NFATC2IP
• Assay Reference Genome Location: Chr.16:28951170 on build GRCh38
• Cytoband: 16p11.2

Target Gene Details

• Entrez Gene ID: 84901
• Gene Name: nuclear factor of activated T-cells 2 interacting protein
• Gene Aliases: ESC2, NIP45, RAD60
• Location: Chr.16:28950988-28967097 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFATC2IP	NM_032815.3	1	174	NP_116204.3
	AF458593.1	1	184	AAM49721.1
	AK074761.1	1	164	BAC11189.1
	AK304172.1	1	164
	BC068007.1			AAH68007.1
	BC101741.1	1	234	AAI01742.1
	BC112182.1	1	234	AAI12183.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv4987n54	Chr.16:28824884 - 29032129 on Build GRCh38	Gain	ATP2A1-AS1 ATXN2L ATP2A1 LAT SH2B1 MIR4721 CD19 MIR4517 NFATC2IP RABEP2 SPNS1 TUFM
esv3892826	Chr.16:28814728 - 29032129 on Build GRCh38	Gain+Loss	ATP2A1-AS1 ATXN2L ATP2A1 LAT SH2B1 MIR4721 CD19 MIR4517 NFATC2IP RABEP2 SPNS1 TUFM
esv2758640	Chr.16:28163817 - 29139232 on Build GRCh38	Gain+Loss	ATP2A1-AS1 ATXN2L SULT1A1 SH2B1 NFATC2IP NPIPB6 IL27 LOC101928215 EIF3CL ATP2A1 LAT MIR6862-1 CD19 RRN3P2 NUPR1 SGF29 RABEP2 EIF3C SPNS1 TUFM SBK1 MIR4721 NPIPB8 MIR6862-2 APOBR XPO6 CLN3 NPIPB9 NPIP MIR4517 SULT1A2
nsv518648	Chr.16:28826194 - 29032129 on Build GRCh38	Loss	ATP2A1-AS1 ATXN2L ATP2A1 LAT SH2B1 MIR4721 CD19 MIR4517 NFATC2IP RABEP2 SPNS1 TUFM
nsv1059555	Chr.16:28373144 - 29195838 on Build GRCh38	Gain	ATP2A1-AS1 ATXN2L SULT1A1 SH2B1 NFATC2IP IL27 LOC101928215 EIF3CL ATP2A1 LAT MIR6862-1 CD19 RRN3P2 NUPR1 SGF29 RABEP2 EIF3C SPNS1 TUFM MIR4721 NPIPB8 MIR6862-2 APOBR CLN3 LOC107984832 NPIPB9 NPIP MIR4517 SULT1A2
dgv2831n100	Chr.16:28812594 - 29032542 on Build GRCh38	Gain	ATP2A1-AS1 ATXN2L ATP2A1 LAT SH2B1 MIR4721 CD19 MIR4517 NFATC2IP RABEP2 SPNS1 TUFM
esv3570454	Chr.16:28799004 - 29032129 on Build GRCh38	Gain	ATP2A1-AS1 ATXN2L ATP2A1 LAT SH2B1 MIR4721 CD19 MIR4517 NFATC2IP RABEP2 SPNS1 TUFM
nsv571805	Chr.16:28824174 - 29032129 on Build GRCh38	Loss	ATP2A1-AS1 ATXN2L ATP2A1 LAT SH2B1 MIR4721 CD19 MIR4517 NFATC2IP RABEP2 SPNS1 TUFM
dgv2830n100	Chr.16:28620264 - 29032542 on Build GRCh38	Gain	ATP2A1-AS1 ATXN2L SULT1A1 SH2B1 MIR4721 NPIPB8 NFATC2IP MIR6862-2 ATP2A1 LAT NPIPB9 CD19 MIR4517 RABEP2 EIF3C SPNS1 TUFM

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cytokine production
protein sumoylation
positive regulation of transcription from RNA polymerase II promoter

Function(s)

protein tag