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See other TSPEAR CNV Assays ›
Gene Symbol
TSPEAR
Assay Reference Genome
Location

Chr.21:44499334 on build GRCh38
Cytoband
21q22.3
Assay ID Hs00977002_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54084

Gene Name:

 thrombospondin type laminin G domain and EAR repeats

Gene Aliases:

 C21orf29, DFNB98, TSP-EAR

Location:

 Chr.21:44497892-44711580 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSPEAR NM_001272037.1 13 2587 NP_001258966.1
NM_144991.2 12 2525 NP_659428.2
AJ487962.1 12 2525 CAD32309.1
BC115415.1 10 2051

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834109 Chr.21:44449469 - 44510164 on Build GRCh38 Loss LOC100505727 TSPEAR LRRC3 TSPEAR-AS1 LRRC3-AS1
nsv953646 Chr.21:44279118 - 44523117 on Build GRCh38 Deletion LOC100505727 TSPEAR PFKL TRPM2-AS TSPEAR-AS2 LRRC3 TRPM2 C21orf2 AIRE TSPEAR-AS1 LRRC3-AS1
nsv1058359 Chr.21:44304172 - 44547662 on Build GRCh38 Gain LOC100505727 TSPEAR KRTAP10-1 PFKL TRPM2-AS TSPEAR-AS2 LRRC3 TRPM2 C21orf2 TSPEAR-AS1 LRRC3-AS1
nsv587802 Chr.21:44485022 - 44508296 on Build GRCh38 Loss LOC100505727 TSPEAR TSPEAR-AS1
esv2723638 Chr.21:44249174 - 44593709 on Build GRCh38 Deletion KRTAP10-6 TSPEAR LOC105372833 KRTAP10-1 KRTAP10-2 TRPM2-AS TSPEAR-AS2 LRRC3 TRPM2 C21orf2 TSPEAR-AS1 LOC100505727 KRTAP10-3 KRTAP10-4 KRTAP10-5 PFKL AIRE DNMT3L LRRC3-AS1
nsv1055163 Chr.21:44475780 - 44646211 on Build GRCh38 Gain KRTAP10-6 TSPEAR KRTAP10-1 KRTAP10-2 TSPEAR-AS2 KRTAP10-10 TSPEAR-AS1 LOC100505727 KRTAP10-3 KRTAP10-4 KRTAP10-8 KRTAP10-5 KRTAP10-7 KRTAP10-9
esv33817 Chr.21:43749531 - 44647625 on Build GRCh38 Loss KRTAP10-11 TSPEAR KRTAP10-1 KRTAP10-2 TRPM2-AS CSTB TRPM2 C21orf2 TSPEAR-AS1 KRTAP10-3 KRTAP10-8 KRTAP10-7 PWP2 AIRE KRTAP10-9 DNMT3L LRRC3-AS1 KRTAP10-6 LOC105372833 AATBC PDXK TSPEAR-AS2 LRRC3 KRTAP10-10 AGPAT3 ICOSLG LOC100505727 C21orf33 KRTAP10-4 KRTAP10-5 PFKL RRP1 TRAPPC10

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

intercellular signal molecule

Gene Ontology Categories:

Function(s) Process(es)


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