Assay Details
Target Gene Details
Entrez Gene ID: | 54879 |
Gene Name: | suppression of tumorigenicity 7 like |
Gene Aliases: |
FAM4B, ST7R, STLR |
Location: |
Chr.1:112517444-112620838 on Build GRCh38 |
Assay Gene Location: | Within Exon 22 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ST7L | NM_001308264.1 | 14 | 2750 | NP_001295193.1 |
| NM_017744.4 | 15 | 2959 | NP_060214.2 | |
| NM_138727.3 | 15 | 2908 | NP_620055.1 | |
| NM_138728.2 | 14 | 2866 | NP_620056.1 | |
| XM_005270963.4 | 15 | 2482 | XP_005271020.1 | |
| XM_005270964.3 | 14 | 2574 | XP_005271021.1 | |
| XM_011541628.2 | XP_011539930.1 | |||
| XM_011541629.2 | 15 | 2682 | XP_011539931.1 | |
| XM_011541630.2 | 15 | 3378 | XP_011539932.1 | |
| XM_011541631.2 | 15 | 2506 | XP_011539933.1 | |
| XM_017001536.1 | 13 | 2481 | XP_016857025.1 | |
| XM_017001537.1 | 12 | 2301 | XP_016857026.1 | |
| XM_017001538.1 | 13 | 2294 | XP_016857027.1 | |
| AK000291.1 | 4 | 1405 | BAA91060.1 | |
| AK095837.1 | 12 | 2174 | ||
| AK225307.1 | 4 | 1405 | ||
| BX537988.1 | 17 | 2915 | CAD97948.1 | |
| BX538338.1 | 9 | 1890 | CAD98103.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv831081 | Chr.1:112392298 - 112580018 on Build GRCh38 | Loss |
|
| esv27061 | Chr.1:112150007 - 112703641 on Build GRCh38 | Gain+Loss |
|
More Information
Additional Information:
For this assay, SNP(s) [rs114323109] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
|

Genomic Map