Hs01021761_cn

• Gene Symbol: CCDC183-AS1
• Assay Reference Genome Location: Chr.9:136808290 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 100131193
• Gene Name: CCDC183 antisense RNA 1
• Gene Aliases: KIAA1984-AS1
• Location: Chr.9:136803927-136808848 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CCDC183-AS1	NR_024580.1
	AK055547.1			BAB70952.1
	DA710348.1

Target Gene Details

• Entrez Gene ID: 55684
• Gene Name: RAB, member RAS oncogene family-like 6
• Gene Aliases: C9orf86, PARF, RBEL1, pp8875
• Location: Chr.9:136807922-136841187 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RABL6	NM_001173988.1	1	369	NP_001167459.1
	NM_001173989.2	1	369	NP_001167460.1
	NM_024718.4	1	369	NP_078994.3
	AK307431.1	2	223
	BC002945.2	1	132	AAH02945.2
	BC021095.1	1	73	AAH21095.2
	BC035786.1	1	324	AAH35786.1
	CR989427.1	1	369
	CX784448.1	1	362
	DQ141240.1	1	94	AAZ73768.1
	EF156752.1	1	96
	EF156753.1	1	95
	GQ169126.1	1	348
	GQ169127.1	1	358

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv1246n67	Chr.9:136806360 - 136823613 on Build GRCh38	Gain	CCDC183-AS1 CCDC183 RABL6
nsv1119616	Chr.9:136808148 - 136808648 on Build GRCh38	Deletion	CCDC183-AS1 RABL6
nsv818738	Chr.9:136740043 - 137009585 on Build GRCh38	Gain	C9orf142 C8G MIR4292 LCN6 LOC100128593 EDF1 LCNL1 LCN12 CCDC183-AS1 TMEM141 MAMDC4 PTGDS MIR6722 PHPT1 LCN8 FBXW5 CLIC3 LCN10 LCN15 RABL6 PRR31 CCDC183 TRAF2 MIR4479 C9orf172 ABCA2
esv29973	Chr.9:136795692 - 136859658 on Build GRCh38	Loss	CCDC183-AS1 MIR4292 MAMDC4 CCDC183 PHPT1 RABL6 C9orf172
nsv469918	Chr.9:136359865 - 137173890 on Build GRCh38	Loss	SNAPC4 CARD9 C9orf142 C8G MIR4292 LOC100128593 EDF1 MIR3621 TMEM141 C9orf139 LOC101930307 NOTCH1 GRIN1 MIR6722 PHPT1 LRRC26 TMEM210 DPP7 AGPAT2 CLIC3 LCN10 UAP1L1 LCN15 RABL6 MIR126 HSPC324 MAN1B1-AS1 SNHG7 SNORA17B TRAF2 FUT7 C9orf172 EGFL7 C9orf163 SEC16A MAN1B1 LCN6 INPP5E SAPCD2 LCNL1 LCN12 CCDC183-AS1 MAMDC4 PTGDS SDCCAG3 DNLZ PMPCA LINC01451 LCN8 FBXW5 SNORA17A MIR4673 PRR31 MIR4674 NALT1 FAM69B CCDC183 ENTPD2 NPDC1 MIR4479 ABCA2
esv2759720	Chr.9:136356377 - 136932033 on Build GRCh38	Loss	SNAPC4 CARD9 C9orf163 SEC16A MIR4292 LCN6 LOC100128593 EDF1 INPP5E CCDC183-AS1 TMEM141 NOTCH1 MAMDC4 MIR6722 SDCCAG3 PHPT1 DNLZ PMPCA LINC01451 LCN8 AGPAT2 SNORA17A LCN10 LCN15 RABL6 MIR4673 MIR4674 MIR126 GPSM1 HSPC324 NALT1 FAM69B SNHG7 SNORA17B CCDC183 TRAF2 MIR4479 C9orf172 EGFL7
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	ANAPC2 C9orf142 C8G MIR4292 LOC100128593 EDF1 MIR3621 TMEM141 C9orf139 LOC101930307 STPG3 GRIN1 MIR6722 PHPT1 LRRC26 RNF224 RNF208 TMEM210 DPP7 TUBB4B FAM166A AGPAT2 SLC34A3 CLIC3 LCN10 UAP1L1 LCN15 RABL6 NRARP MIR126 TPRN HSPC324 MAN1B1-AS1 SSNA1 SNHG7 SNORA17B TRAF2 FUT7 C9orf172 EGFL7 NDOR1 NELFB MAN1B1 LCN6 C9orf173-AS1 SAPCD2 LCNL1 LCN12 EXD3 CCDC183-AS1 MAMDC4 PTGDS TMEM203 LINC01451 LCN8 FBXW5 SNORA17A TOR4A PRR31 CYSRT1 FAM69B CCDC183 ENTPD2 NPDC1 MIR4479 ABCA2

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

small GTPase

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction

Function(s)

protein binding
GTP binding