Hs01028513_cn

• Gene Symbol: LSP1
• Assay Reference Genome Location: Chr.11:1880127 on build GRCh38
• Cytoband: 11p15.5

Target Gene Details

• Entrez Gene ID: 4046
• Gene Name: lymphocyte-specific protein 1
• Gene Aliases: WP34, pp52
• Location: Chr.11:1852970-1892263 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LSP1	NM_001013253.1			NP_001013271.1
	NM_001013254.1			NP_001013272.1
	NM_001013255.1			NP_001013273.1
	NM_001242932.1			NP_001229861.1
	NM_001289005.1			NP_001275934.1
	NM_002339.2			NP_002330.1
	AK056576.1
	AK092071.1
	AK222733.1			BAD96453.1
	AK290279.1
	AK292033.1
	BC001785.1			AAH01785.1
	BQ893037.1
	CR541728.1			CAG46529.1
	CR541754.1			CAG46554.1
	S67783.1			AAB29545.1
	X55188.1			CAA38971.1

Target Gene Details

• Entrez Gene ID: 102465993
• Gene Name: microRNA 7847
• Gene Aliases: hsa-mir-7847
• Location: Chr.11:1880045-1880147 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR7847	NR_107001.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1159792	Chr.11:1844881 - 1887776 on Build GRCh38	Deletion	MIR4298 LSP1 MIR7847
nsv1047474	Chr.11:1803515 - 2043381 on Build GRCh38	Gain	MIR4298 TNNI2 MRPL23-AS1 LSP1 MIR7847 H19 MIR675 SYT8 LINC01219 LINC01150 TNNT3 MRPL23 HOTS SNORD131
nsv61	Chr.11:1878156 - 1919990 on Build GRCh38	Deletion	LINC01150 TNNT3 LSP1 MIR7847
nsv553050	Chr.11:1813024 - 1884944 on Build GRCh38	Loss	SYT8 MIR4298 TNNI2 LSP1 MIR7847
dgv1565n54	Chr.11:1844330 - 1891496 on Build GRCh38	Loss	MIR4298 LSP1 MIR7847
esv29980	Chr.11:1820597 - 2097889 on Build GRCh38	Loss	MIR4298 TNNI2 MRPL23-AS1 LSP1 MIR7847 H19 MIR675 SYT8 LINC01219 LINC01150 TNNT3 MRPL23 HOTS SNORD131
nsv553047	Chr.11:1733170 - 2418537 on Build GRCh38	Gain	TH CTSD TNNI2 MRPL23-AS1 IFITM10 INS-IGF2 TSPAN32 ASCL2 INS SYT8 TSSC4 LINC01219 LINC01150 CD81 HOTS MIR4298 MIR483 IGF2-AS LSP1 IGF2 MIR7847 H19 MIR675 MIR4686 TNNT3 MRPL23 SNORD131 CD81-AS1 TRPM5 C11orf21
nsv951282	Chr.11:1862771 - 1894970 on Build GRCh38	Deletion	LSP1 MIR7847
nsv522320	Chr.11:1835882 - 1996938 on Build GRCh38	Loss	MIR4298 TNNI2 MRPL23-AS1 LSP1 MIR7847 H19 MIR675 SYT8 LINC01219 LINC01150 TNNT3 MRPL23 HOTS SNORD131
nsv467648	Chr.11:1853174 - 1891496 on Build GRCh38	Loss	MIR4298 LSP1 MIR7847
nsv553058	Chr.11:1863112 - 1892147 on Build GRCh38	Loss	LSP1 MIR7847
nsv7643	Chr.11:1867726 - 1927695 on Build GRCh38	Deletion	LINC01150 TNNT3 LSP1 MIR7847
nsv553053	Chr.11:1836040 - 1887776 on Build GRCh38	Loss	SYT8 MIR4298 TNNI2 LSP1 MIR7847

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-motor actin binding protein

Gene Ontology Categories:

Process(es)

movement of cell or subcellular component
chemotaxis
cellular defense response
signal transduction

Function(s)

actin binding
signal transducer activity