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See other TSPEAR CNV Assays ›
Gene Symbol
TSPEAR
Assay Reference Genome
Location

Chr.21:44498706 on build GRCh38
Cytoband
21q22.3
Assay ID Hs01038393_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54084

Gene Name:

 thrombospondin type laminin G domain and EAR repeats

Gene Aliases:

 C21orf29, DFNB98, TSP-EAR

Location:

 Chr.21:44497892-44711580 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSPEAR NM_001272037.1 13 3215 NP_001258966.1
NM_144991.2 12 3153 NP_659428.2
AJ487962.1 12 3153 CAD32309.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834109 Chr.21:44449469 - 44510164 on Build GRCh38 Loss TSPEAR-AS1 LRRC3 LRRC3-AS1 LOC100505727 TSPEAR
nsv953646 Chr.21:44279118 - 44523117 on Build GRCh38 Deletion TSPEAR-AS1 TRPM2 LRRC3 LRRC3-AS1 PFKL TRPM2-AS C21orf2 AIRE LOC100505727 TSPEAR-AS2 TSPEAR
nsv1058359 Chr.21:44304172 - 44547662 on Build GRCh38 Gain TSPEAR-AS1 TRPM2 LRRC3 LRRC3-AS1 KRTAP10-1 PFKL TRPM2-AS C21orf2 LOC100505727 TSPEAR-AS2 TSPEAR
nsv587802 Chr.21:44485022 - 44508296 on Build GRCh38 Loss TSPEAR-AS1 LOC100505727 TSPEAR
esv2723638 Chr.21:44249174 - 44593709 on Build GRCh38 Deletion TSPEAR-AS1 LRRC3 KRTAP10-1 DNMT3L PFKL LOC105372833 KRTAP10-5 TRPM2-AS C21orf2 AIRE LOC100505727 TSPEAR-AS2 TRPM2 KRTAP10-4 LRRC3-AS1 KRTAP10-3 KRTAP10-6 KRTAP10-2 TSPEAR
nsv1055163 Chr.21:44475780 - 44646211 on Build GRCh38 Gain TSPEAR-AS1 KRTAP10-1 KRTAP10-8 KRTAP10-5 LOC100505727 TSPEAR-AS2 KRTAP10-9 KRTAP10-4 KRTAP10-10 KRTAP10-3 KRTAP10-6 KRTAP10-7 KRTAP10-2 TSPEAR
esv33817 Chr.21:43749531 - 44647625 on Build GRCh38 Loss AGPAT3 TSPEAR-AS1 LRRC3 KRTAP10-1 DNMT3L KRTAP10-8 PFKL AATBC PWP2 KRTAP10-5 TRPM2-AS TSPEAR-AS2 RRP1 TRPM2 KRTAP10-10 TRAPPC10 LRRC3-AS1 KRTAP10-3 KRTAP10-7 PDXK KRTAP10-11 KRTAP10-2 ICOSLG C21orf33 LOC105372833 CSTB C21orf2 AIRE LOC100505727 KRTAP10-9 KRTAP10-4 KRTAP10-6 TSPEAR

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

intercellular signal molecule

Gene Ontology Categories:

Function(s) Process(es)


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