Hs01041246_cn

• Gene Symbol: HMGN2P46
• Assay Reference Genome Location: Chr.15:45520960 on build GRCh38
• Cytoband: 15q21.1

Target Gene Details

• Entrez Gene ID: 283651
• Gene Name: high mobility group nucleosomal binding domain 2 pseudogene 46
• Gene Aliases: C15orf21, D-PCa-2
• Location: Chr.15:45511136-45556730 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HMGN2P46	NR_022014.1
	AK096745.1	5	617	BAC04856.1
	AY271964.1			AAP12643.1
	AY271965.1			AAP12644.1
	AY271966.1			AAP12645.1
	AY271967.1			AAP12646.1

Target Gene Details

• Entrez Gene ID: 7782
• Gene Name: solute carrier family 30 member 4
• Gene Aliases: ZNT4, znT-4
• Location: Chr.15:45479613-45523685 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC30A4	NM_001321036.1			NP_001307965.1
	NM_013309.5			NP_037441.2
	XM_011521997.2			XP_011520299.1
	XM_017022560.1			XP_016878049.1
	XM_017022561.1			XP_016878050.1
	XM_017022562.1			XP_016878051.1
	AF025409.1			AAB82561.1
	AK290874.1
	BC026089.2			AAH26089.1
	BM789500.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3892684	Chr.15:45307172 - 46327637 on Build GRCh38	Gain	MIR147B GATM SPATA5L1 LOC105370802 SLC30A4 HMGN2P46 SQRDL C15orf48 LOC105376714 BLOC1S6
esv3569553	Chr.15:45366990 - 46080626 on Build GRCh38	Gain	MIR147B GATM SPATA5L1 LOC105370802 SLC30A4 HMGN2P46 SQRDL C15orf48 LOC105376714 BLOC1S6
nsv1160292	Chr.15:45351161 - 46175480 on Build GRCh38	Duplication	MIR147B GATM SPATA5L1 LOC105370802 SLC30A4 HMGN2P46 SQRDL C15orf48 LOC105376714 BLOC1S6
nsv1045556	Chr.15:45485198 - 45592656 on Build GRCh38	Gain	SLC30A4 HMGN2P46 BLOC1S6

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein, transporter

Gene Ontology Categories:

Process(es)

response to toxic substance
response to zinc ion
zinc ion homeostasis
regulation of sequestering of zinc ion
zinc II ion transmembrane transport

Function(s)

zinc ion transmembrane transporter activity