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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89644917 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01044873_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 6 1917 NP_001076783.1
NM_002768.4 7 1937 NP_002759.2
NR_046418.2 7 2105
AI356110.1
AK302055.1 6 1211
BC010000.2 2 1525 AAH10000.2
D38554.1 7 1805 BAA07557.1
U58048.1 7 1994 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss TUBB3 SPATA33 VPS9D1 DPEP1 GAS8-AS1 DEF8 LOC105371419 FANCA LOC107984817 AFG3L1P MC1R CDK10 CHMP1A CENPBD1 VPS9D1-AS1 DBNDD1 SPIRE2 SPATA2L GAS8 TCF25 ZNF276
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss TUBB3 SPATA33 DPEP1 GAS8-AS1 LOC100287036 DEF8 LOC105371419 LOC107984817 TUBB8P7 ZNF778 RPL13 AFG3L1P MC1R CDK10 CENPBD1 DBNDD1 SPATA2L GAS8 ZNF276 SPG7 LOC101927817 VPS9D1 FANCA FAM157C CPNE7 SNORD68 URAHP LOC105371414 ANKRD11 CHMP1A VPS9D1-AS1 SPIRE2 PRDM7 TCF25
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain SPATA33 DPEP1 CDK10 CHMP1A SPATA2L
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SPG7 LOC101927817 SPATA33 DPEP1 ANKRD11 CHMP1A CPNE7 RPL13 SNORD68
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss TUBB3 SPATA33 LOC105371409 PIEZO1 LOC100289580 SNAI3 GALNS LOC107984817 TUBB8P7 ZNF778 SNAI3-AS1 RPL13 AFG3L1P IL17C MC1R LOC339059 MIR4722 DBNDD1 SPATA2L CDH15 CYBA LOC107987238 SPG7 RNF166 VPS9D1 FANCA CPNE7 CBFA2T3 VPS9D1-AS1 MVD SPIRE2 PRDM7 APRT SLC22A31 DPEP1 GAS8-AS1 LOC100287036 DEF8 LOC105371419 ACSF3 PABPN1L LOC100129697 CDK10 CENPBD1 LOC400558 GAS8 ZNF276 CTU2 LOC101927817 CDT1 FAM157C TRAPPC2L LINC00304 SNORD68 URAHP LOC101927793 LOC105371414 ANKRD11 CHMP1A TCF25
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SPG7 SPATA33 VPS9D1 DPEP1 FANCA CPNE7 RPL13 SNORD68 CDK10 CHMP1A VPS9D1-AS1 SPATA2L ZNF276
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain SPG7 SPATA33 DPEP1 CHMP1A CPNE7 RPL13 SNORD68

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