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See other PLOD3 CNV Assays ›
Gene Symbol
PLOD3
Assay Reference Genome
Location

Chr.7:101216447 on build GRCh38
Cytoband
7q22.1
Assay ID Hs01045740_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8985

Gene Name:

 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

Gene Aliases:

 LH3

Location:

 Chr.7:101205977-101217730 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLOD3 NM_001084.4 NP_001075.1
AF046889.1 AAC39753.1
AF068229.1 AAC34808.1
AK075338.1
AK297559.1
AK298537.1
AK312743.1
AY220458.1 AAO61775.1
BC011674.2 AAH11674.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3614321 Chr.7:101210074 - 101222993 on Build GRCh38 Gain ZNHIT1 PLOD3
dgv11534n54 Chr.7:101160859 - 101238359 on Build GRCh38 Loss CLDN15 ZNHIT1 VGF NAT16 PLOD3 AP1S1 MOGAT3
nsv607973 Chr.7:101139179 - 101230554 on Build GRCh38 Loss ZNHIT1 VGF SERPINE1 NAT16 PLOD3 AP1S1 MOGAT3 MIR4653
nsv1018841 Chr.7:101117129 - 101225018 on Build GRCh38 Gain ZNHIT1 VGF SERPINE1 NAT16 PLOD3 AP1S1 MOGAT3 MIR4653
esv2422376 Chr.7:101100204 - 101373190 on Build GRCh38 Duplication CLDN15 VGF COL26A1 IFT22 SERPINE1 NAT16 LOC101927721 AP1S1 ZNHIT1 LOC101927746 FIS1 PLOD3 MOGAT3 MIR4653
esv2422326 Chr.7:101190168 - 101356850 on Build GRCh38 Duplication CLDN15 ZNHIT1 LOC101927746 IFT22 LOC101927721 FIS1 PLOD3 MOGAT3
nsv1030604 Chr.7:101074451 - 101580185 on Build GRCh38 Gain CLDN15 VGF COL26A1 IFT22 SERPINE1 NAT16 LOC101927721 AP1S1 TRIM56 ZNHIT1 LOC101927746 LINC01007 FIS1 PLOD3 MOGAT3 MIR4653
esv2752134 Chr.7:101156850 - 101498586 on Build GRCh38 Gain CLDN15 VGF COL26A1 IFT22 NAT16 LOC101927721 AP1S1 ZNHIT1 LOC101927746 FIS1 PLOD3 MOGAT3 MIR4653
esv2734888 Chr.7:99975623 - 101290285 on Build GRCh38 Deletion MIR93 NAT16 GNB2 AP4M1 SRRT PVRIG MIR6840 EPHB4 LRCH4 PCOLCE MUC17 TRIP6 MOGAT3 LOC102724094 UFSP1 AZGP1 MIR4653 ZASP CLDN15 VGF SERPINE1 MOSPD3 ZNF3 PPP1R35 MIR106B PVRIG2P STAG3L5P PMS2P1 ACHE TSC22D4 CNPY4 C7orf43 AZGP1P1 PILRB ACTL6B ZAN LAMTOR4 MBLAC1 LOC105375429 PCOLCE-AS1 TFR2 MEPCE PILRA SPDYE3 FBXO24 AP1S1 EPO SAP25 ZCWPW1 GAL3ST4 ZSCAN21 STAG3L5P-PVRIG2P-PILRB NYAP1 TAF6 COPS6 PLOD3 MIR25 POP7 MIR6875 AGFG2 GIGYF1 ZKSCAN1 MCM7 GATS STAG3 TRIM56 ZNHIT1 MUC3A MUC12 C7orf61 FIS1 MIR4658 GPC2 SLC12A9
nsv831075 Chr.7:101049016 - 101273737 on Build GRCh38 Loss TRIM56 CLDN15 ZNHIT1 VGF SERPINE1 NAT16 FIS1 MUC17 PLOD3 AP1S1 MOGAT3 MIR4653
nsv607974 Chr.7:101149529 - 101328323 on Build GRCh38 Loss CLDN15 ZNHIT1 VGF LOC101927746 IFT22 NAT16 LOC101927721 FIS1 PLOD3 AP1S1 MOGAT3 MIR4653
esv3614319 Chr.7:101206795 - 101265542 on Build GRCh38 Gain CLDN15 ZNHIT1 FIS1 PLOD3
nsv831076 Chr.7:101185566 - 101368393 on Build GRCh38 Loss CLDN15 ZNHIT1 LOC101927746 COL26A1 IFT22 LOC101927721 FIS1 PLOD3 MOGAT3

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