Hs01064886_cn

• Gene Symbol: GALNT9
• Assay Reference Genome Location: Chr.12:132201168 on build GRCh38
• Cytoband: 12q24.33

Target Gene Details

• Entrez Gene ID: 50614
• Gene Name: polypeptide N-acetylgalactosaminyltransferase 9
• Gene Aliases: GALNAC-T9, GALNACT9
• Location: Chr.12:132195829-132329364 on Build GRCh38
• Assay Gene Location: Within Exon 14

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GALNT9	NM_001122636.1	8	1473	NP_001116108.1
	NM_021808.3	4	537	NP_068580.2
	XM_017019371.1	7	1205	XP_016874860.1
	XM_017019372.1	7	1165	XP_016874861.1
	XM_017019373.1	8	1522	XP_016874862.1
	XM_017019374.1	7	1142	XP_016874863.1
	AB040672.2	8	1357	BAB13699.2
	AF458594.1	4	534	AAM49722.1
	AJ505960.1	1	79	CAD44540.1
	AK054820.1	5	674
	AK055773.1	7	1130
	BC093817.1	3	347
	BC093819.1	3	347
	BI760629.1
	CB154648.1	2	133
	DR001000.1	3	341

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv3019n54	Chr.12:132181784 - 132203592 on Build GRCh38	Loss	GALNT9
nsv560966	Chr.12:132194518 - 132483313 on Build GRCh38	Gain	LOC100130238 MUC8 LOC105370092 LOC101928416 GALNT9
esv3631288	Chr.12:132190709 - 132205907 on Build GRCh38	Gain	GALNT9
esv3892285	Chr.12:132154873 - 132201281 on Build GRCh38	Gain	GALNT9
esv3580551	Chr.12:132196503 - 132206310 on Build GRCh38	Loss	GALNT9
nsv952512	Chr.12:132192256 - 132711214 on Build GRCh38	Deletion	MUC8 FBRSL1 LOC105370092 LOC101928416 LOC100996573 PXMP2 MIR6763 POLE LOC100130238 PGAM5 GALNT9 P2RX2 LRCOL1
nsv520897	Chr.12:132199317 - 132218324 on Build GRCh38	Loss	GALNT9
nsv1041402	Chr.12:132076412 - 132441297 on Build GRCh38	Gain	LOC100130238 EP400NL LOC105370092 DDX51 LOC101928416 EP400 GALNT9 NOC4L
nsv528119	Chr.12:132174775 - 132218324 on Build GRCh38	Loss	GALNT9
nsv826563	Chr.12:132125383 - 132622340 on Build GRCh38	Gain	MUC8 EP400NL FBRSL1 LOC105370092 DDX51 LOC101928416 LOC100996573 MIR6763 LOC100130238 GALNT9 NOC4L P2RX2 LRCOL1
dgv103n21	Chr.12:132117051 - 132442096 on Build GRCh38	Loss	LOC100130238 EP400NL LOC105370092 DDX51 LOC101928416 GALNT9 NOC4L
nsv428285	Chr.12:132065104 - 132208513 on Build GRCh38	Gain	EP400NL DDX51 EP400 GALNT9 NOC4L

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

protein O-linked glycosylation
O-glycan processing

Function(s)

polypeptide N-acetylgalactosaminyltransferase activity
carbohydrate binding
metal ion binding