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See other NPDC1 CNV Assays ›
Gene Symbol
NPDC1
Assay Reference Genome
Location

Chr.9:137042952 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01072935_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 56654

Gene Name:

 neural proliferation, differentiation and control 1

Gene Aliases:

 CAB, CAB-, CAB-1, CAB1, NPDC-1

Location:

 Chr.9:137039457-137046224 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NPDC1 NM_015392.3 NP_056207.3
AF272357.1 AAF76225.1
AF283247.1 AAF82603.1
AF285836.1 AAK27328.1
AF327349.1 AAL56010.1
AK054950.1
AK074793.1 BAC11212.1
AK225091.1
BC004217.2 AAH04217.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss UAP1L1 C9orf139 GRIN1 PTGDS MAN1B1 MAN1B1-AS1 NPDC1 ENTPD2 FUT7 C9orf142 MIR3621 PRR31 LRRC26 LOC101930307 ABCA2 LCNL1 CLIC3 TMEM210 SAPCD2 DPP7
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss C9orf139 SSNA1 FUT7 NOXA1 FAM166A NELFB CYSRT1 TMEM210 ANAPC2 TRAF2 UAP1L1 CCDC183 TMEM203 NPDC1 ENTPD2 MIR4292 C9orf173-AS1 C9orf142 NSMF LCN12 TPRN PRR31 TOR4A RNF224 ENTPD8 DPP7 C9orf172 GRIN1 SLC34A3 MIR3621 PHPT1 MIR4479 LRRC26 EXD3 LOC101930307 ABCA2 NDOR1 LCNL1 CLIC3 EDF1 PNPLA7 SAPCD2 CCDC183-AS1 PTGDS MAN1B1 STPG3 MAN1B1-AS1 MIR7114 C8G RABL6 NRARP FBXW5 MAMDC4 RNF208 TUBB4B
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion UAP1L1 C9orf139 PTGDS MAN1B1 MAN1B1-AS1 NPDC1 ENTPD2 FUT7 C9orf142 LCN12 C8G PRR31 LOC101930307 ABCA2 LCNL1 CLIC3 SAPCD2 DPP7
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss C9orf139 INPP5E SNAPC4 PMPCA SDCCAG3 FUT7 MIR4674 SNORA17B TMEM210 TMEM141 TRAF2 UAP1L1 CCDC183 LCN15 C9orf163 EGFL7 NPDC1 ENTPD2 MIR4292 C9orf142 LCN6 MIR126 LCN12 LCN10 PRR31 MIR6722 LINC01451 MIR4673 DPP7 HSPC324 C9orf172 GRIN1 NALT1 MIR3621 PHPT1 LOC100128593 MIR4479 LRRC26 LOC101930307 DNLZ ABCA2 SNHG7 LCNL1 CLIC3 EDF1 SAPCD2 CCDC183-AS1 NOTCH1 PTGDS MAN1B1 MAN1B1-AS1 C8G SNORA17A RABL6 SEC16A CARD9 FAM69B FBXW5 MAMDC4 LCN8 AGPAT2
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss UAP1L1 C9orf139 GRIN1 MAN1B1 MAN1B1-AS1 NPDC1 ENTPD2 MIR3621 LRRC26 LOC101930307 TMEM210 SAPCD2 DPP7
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain UAP1L1 C9orf139 GRIN1 SSNA1 MAN1B1 MAN1B1-AS1 NPDC1 ENTPD2 FUT7 MIR3621 LRRC26 LOC101930307 TMEM210 ANAPC2 SAPCD2 DPP7
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss C9orf139 ABCA2 NPDC1 ENTPD2 FUT7
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion C9orf139 SSNA1 FUT7 SNORA17B FAM166A NELFB CYSRT1 TMEM210 TMEM141 ANAPC2 TRAF2 UAP1L1 CCDC183 LCN15 TMEM203 EGFL7 NPDC1 ENTPD2 MIR4292 C9orf173-AS1 C9orf142 LCN6 MIR126 LCN12 TPRN LCN10 PRR31 MIR6722 LINC01451 TOR4A RNF224 DPP7 HSPC324 C9orf172 GRIN1 SLC34A3 MIR3621 PHPT1 LOC100128593 MIR4479 LRRC26 EXD3 LOC101930307 ABCA2 NDOR1 SNHG7 LCNL1 CLIC3 EDF1 SAPCD2 CCDC183-AS1 PTGDS MAN1B1 STPG3 MAN1B1-AS1 C8G SNORA17A RABL6 NRARP FAM69B FBXW5 MAMDC4 LCN8 AGPAT2 RNF208 TUBB4B

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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