Genomic Map
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Target Gene Details
Entrez Gene ID: | 283234 |
Gene Name: | coiled-coil domain containing 88B |
Gene Aliases: |
BRLZ, CCDC88, HKRP3, gipie |
Location: |
Chr.11:64340203-64357534 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CCDC88B | NM_032251.5 | 19 | 3203 | NP_115627.6 |
| XM_006718519.3 | 19 | 3215 | XP_006718582.1 | |
| XM_011544957.2 | 18 | 3436 | XP_011543259.1 | |
| XM_011544959.2 | 18 | 3436 | XP_011543261.1 | |
| XM_011544960.2 | 18 | 3119 | XP_011543262.1 | |
| XM_011544962.2 | 5 | 1058 | XP_011543264.1 | |
| AK074126.1 | 12 | 2857 | BAB84952.1 | |
| AK090436.1 | 18 | 3416 | BAC03417.1 | |
| AY491401.1 | AAR83719.1 | |||
| BC040232.1 | 6 | 760 | ||
| BC140822.1 | 19 | 3192 | ||
| BC140824.1 | 19 | 3192 | ||
| BC141866.1 | 19 | 3182 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv555193 | Chr.11:64339671 - 64353102 on Build GRCh38 | Loss |
 CCDC88B
MIR7155
|
| nsv358 | Chr.11:64325464 - 64359765 on Build GRCh38 | Insertion |
RPS6KA4
CCDC88B
MIR7155
|
| nsv832186 | Chr.11:64204788 - 64402587 on Build GRCh38 | Loss |
DNAJC4
TRPT1
TRMT112
ESRRA
KCNK4
PPP1R14B
MIR7155
TEX40
MIR1237
RPS6KA4
NUDT22
CCDC88B
KCNK4-TEX40
FERMT3
PLCB3
PRDX5
FKBP2
BAD
LOC105369340
GPR137
VEGFB
|
| dgv13n64 | Chr.11:64329761 - 64362250 on Build GRCh38 | Loss |
RPS6KA4
CCDC88B
MIR7155
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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