Hs01087132_cn

• Gene Symbol: HCRTR1
• Assay Reference Genome Location: Chr.1:31630349 on build GRCh38
• Cytoband: 1p35.2

Target Gene Details

• Entrez Gene ID: 3061
• Gene Name: hypocretin receptor 1
• Gene Aliases: OX1R
• Location: Chr.1:31617700-31632518 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HCRTR1	XM_017001107.1			XP_016856596.1

Target Gene Details

• Entrez Gene ID: 553115
• Gene Name: penta-EF-hand domain containing 1
• Gene Aliases: ABP32, PEF1A
• Location: Chr.1:31629862-31645237 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PEF1	NM_012392.3	5	1492	NP_036524.1
	NR_033686.1	4	1191
	NR_033688.1	5	1333
	XM_011541745.1	5	1119	XP_011540047.1
	XM_011541746.2	5	1586	XP_011540048.1
	XM_011541747.1	5	1461	XP_011540049.1
	XM_017001680.1	5	1450	XP_016857169.1
	XM_017001681.1	5	2757	XP_016857170.1
	AB018357.1	5	1131	BAA84922.1
	AB026628.1	5	1131	BAA85163.1
	AK001420.1	5	1144	BAA91680.1
	AK092483.1	1	2486
	AY359011.1	5	1135	AAQ89370.1
	BC002773.2	5	1121	AAH02773.1
	BC012561.1	5	1137	AAH12561.1
	CA307778.1	1	506

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv545951	Chr.1:31626924 - 31699894 on Build GRCh38	Gain	PEF1 HCRTR1 COL16A1
nsv1000976	Chr.1:31612766 - 31700055 on Build GRCh38	Loss	PEF1 HCRTR1 COL16A1
esv2758930	Chr.1:31209533 - 32000730 on Build GRCh38	Loss	LINC01225 TINAGL1 PEF1 NKAIN1 ADGRB2 PTP4A2 MIR4254 SERINC2 SPOCD1 LINC01226 HCRTR1 ZCCHC17 COL16A1 SNRNP40 FABP3

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor, actin or actin-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

neuropeptide signaling pathway
chemical synaptic transmission
feeding behavior
cellular response to hormone stimulus
regulation of circadian sleep/wake cycle, sleep
regulation of cytosolic calcium ion concentration
response to peptide
proteolysis
response to calcium ion

Function(s)

G-protein coupled receptor activity
neuropeptide receptor activity
orexin receptor activity
peptide hormone binding
peptide binding
calcium-dependent cysteine-type endopeptidase activity
calcium ion binding
protein binding
poly(A) RNA binding
protein heterodimerization activity
protein dimerization activity