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See other TSPEAR CNV Assays ›
Gene Symbol
TSPEAR
Assay Reference Genome
Location

Chr.21:44498354 on build GRCh38
Cytoband
21q22.3
Assay ID Hs01089604_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54084

Gene Name:

 thrombospondin type laminin G domain and EAR repeats

Gene Aliases:

 C21orf29, DFNB98, TSP-EAR

Location:

 Chr.21:44497892-44711580 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSPEAR NM_001272037.1 13 3567 NP_001258966.1
NM_144991.2 12 3505 NP_659428.2
AJ487962.1 12 3505 CAD32309.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834109 Chr.21:44449469 - 44510164 on Build GRCh38 Loss LOC100505727 TSPEAR-AS1 LRRC3 LRRC3-AS1 TSPEAR
nsv953646 Chr.21:44279118 - 44523117 on Build GRCh38 Deletion LOC100505727 TSPEAR-AS1 AIRE LRRC3 LRRC3-AS1 PFKL TSPEAR-AS2 C21orf2 TSPEAR TRPM2 TRPM2-AS
nsv1058359 Chr.21:44304172 - 44547662 on Build GRCh38 Gain LOC100505727 TSPEAR-AS1 LRRC3 LRRC3-AS1 PFKL TSPEAR-AS2 C21orf2 TSPEAR KRTAP10-1 TRPM2 TRPM2-AS
nsv587802 Chr.21:44485022 - 44508296 on Build GRCh38 Loss LOC100505727 TSPEAR-AS1 TSPEAR
esv2723638 Chr.21:44249174 - 44593709 on Build GRCh38 Deletion AIRE LRRC3-AS1 PFKL C21orf2 KRTAP10-5 TSPEAR KRTAP10-6 KRTAP10-1 TRPM2 TRPM2-AS LOC100505727 TSPEAR-AS1 LOC105372833 LRRC3 KRTAP10-4 TSPEAR-AS2 KRTAP10-2 KRTAP10-3 DNMT3L
nsv1055163 Chr.21:44475780 - 44646211 on Build GRCh38 Gain KRTAP10-10 KRTAP10-7 KRTAP10-5 TSPEAR KRTAP10-6 KRTAP10-1 KRTAP10-8 LOC100505727 TSPEAR-AS1 KRTAP10-4 TSPEAR-AS2 KRTAP10-9 KRTAP10-2 KRTAP10-3
esv33817 Chr.21:43749531 - 44647625 on Build GRCh38 Loss AIRE RRP1 LRRC3-AS1 KRTAP10-10 KRTAP10-7 ICOSLG C21orf2 KRTAP10-6 KRTAP10-1 LOC100505727 TSPEAR-AS1 LOC105372833 LRRC3 PDXK TSPEAR-AS2 KRTAP10-9 C21orf33 DNMT3L CSTB KRTAP10-11 PFKL KRTAP10-5 TSPEAR TRPM2 TRPM2-AS TRAPPC10 KRTAP10-8 KRTAP10-4 KRTAP10-2 PWP2 KRTAP10-3 AGPAT3 AATBC

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

intercellular signal molecule

Gene Ontology Categories:

Function(s) Process(es)


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