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See other HAGHL CNV Assays ›
Gene Symbol
HAGHL
Assay Reference Genome
Location

Chr.16:727586 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01101283_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 84264

Gene Name:

 hydroxyacylglutathione hydrolase-like

Gene Aliases:

 -

Location:

 Chr.16:726936-729746 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 1 - Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HAGHL NM_001290137.1 NP_001277066.1
NM_001290139.1 NP_001277068.1
NM_001323635.1 NP_001310564.1
NM_001323636.1 NP_001310565.1
NM_032304.3 NP_115680.1
XM_005255631.4 XP_005255688.1
XM_005255632.1 XP_005255689.1
XM_011522711.1 XP_011521013.1
XM_011522712.1 XP_011521014.1
XM_017023773.1 XP_016879262.1
XM_017023774.1 XP_016879263.1
AB209331.1 BAD92568.1
AK054841.1 BAB70814.1
AK098340.1 1 269
AK293575.1
BC004353.1 AAH04353.1
BC015008.1 AAH15008.1
BC033796.1 AAH33796.1
BG469685.1
BG821643.1
BI333301.1
BI818409.1
CD050886.1
DA056485.1
EL736395.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RHOT2 LUC7L GNG13 EME2 WDR90 WFIKKN1 CRAMP1 WASIR2 MIR940 WDR24 SNORD60 NUBP2 ABCA3 PIGQ CCDC154 NPRL3 SNHG19 HS3ST6 NTHL1 MIR3178 C1QTNF8 CCDC78 NME3 LMF1-AS1 PRSS29P LOC652276 MIR4717 RAB11FIP3 SNORA10 PKD1 TMEM204 DNASE1L2 NDUFB10 MIR1225 AMDHD2 TRAF7 CASKIN1 MSLN LOC105371047 MIR6767 UNKL RGS11 TPSG1 MIR4516 PRR25 MIR5587 SNORA78 TPSAB1 HN1L HBM RPS2 PDIA2 TBL3 BRICD5 TSC2 C16orf91 ECI1 ABCA17P MCRIP2 FAHD1 HBQ1 MIR3176 SLC9A3R2 SYNGR3 RPL23AP5 CEMP1 RAB26 ARHGDIG TMEM8A PRSS27 PGP ERVK13-1 ZNF598 MLST8 LOC100134368 TPSB2 MIR662 MSRB1 LOC105371184 SPSB3 GFER SSTR5 RPL3L LOC106660606 MIR3677 MRPL28 LOC105371045 TSR3 IGFALS LOC105371049 BAIAP3 AXIN1 HAGH LOC107987233 MIR3180-5 CLCN7 LOC100287175 LOC105371046 MAPK8IP3 MIR6511B1 RHBDF1 LOC729652 LINC00254 LINC00235 RNPS1 RHBDL1 MIR6859-4 FLJ42627 NOXO1 LMF1 LOC105371038 RAB40C PDPK1 GNPTG FBXL16 TBC1D24 LOC101929280 CAPN15 NME4 NPW E4F1 SNHG9 MEIOB CCNF HBA2 PTX4 CHTF18 SNRNP25 HAGHL UBE2I HBA1 JMJD8 METTL26 TELO2 SNORA64 ATP6V0C STUB1 LOC107984876 SSTR5-AS1 NARFL MIR6768 FAM173A HBZ NHLRC4 MPG SOX8 NTN3 KCTD5 C16orf59 PRR35 DDX11L10 RNF151 MRPS34 TPSD1 RPUSD1 POLR3K METRN DECR2 IFT140 MIR3177 FAM234A CACNA1H
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss RHOT2 GNG13 LOC105371184 WDR90 WFIKKN1 CHTF18 WDR24 HAGHL PIGQ JMJD8 METTL26 CCDC78 STUB1 MCRIP2 LOC107987233 NARFL MIR3176 FAM173A LOC100287175 RAB11FIP3 NHLRC4 LINC00235 RHBDL1 PRR35 LOC105371038 MSLN RAB40C FBXL16 RPUSD1 LOC101929280 METRN CAPN15 PRR25 MIR5587 MIR662
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss FAM173A MSLN FBXL16 CCDC78 STUB1 METRN WDR24 NARFL HAGHL JMJD8
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss RHOT2 GNG13 LOC105371184 WDR90 WFIKKN1 CHTF18 WDR24 HAGHL PIGQ JMJD8 METTL26 CCDC78 STUB1 MCRIP2 LOC107987233 NARFL MIR3176 FAM173A LOC100287175 RAB11FIP3 NHLRC4 LINC00235 RHBDL1 PRR35 LOC105371038 MSLN RAB40C FBXL16 RPUSD1 LOC101929280 METRN CAPN15 PRR25 MIR5587 MIR662
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion RHOT2 GNG13 LOC105371184 WDR90 WFIKKN1 SSTR5 CHTF18 WDR24 HAGHL PIGQ JMJD8 METTL26 C1QTNF8 CCDC78 STUB1 MCRIP2 LOC107984876 LOC107987233 SSTR5-AS1 NARFL MIR3176 LMF1-AS1 FAM173A LOC100287175 RAB11FIP3 NHLRC4 SOX8 LINC00235 RHBDL1 PRR35 LMF1 LOC105371038 MSLN RAB40C FBXL16 RPUSD1 LOC101929280 METRN CAPN15 PRR25 MIR5587 MIR662
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss RHOT2 FAM173A LOC100287175 LOC105371184 WDR90 WFIKKN1 WDR24 RHBDL1 HAGHL PIGQ JMJD8 LOC105371038 METTL26 RAB40C FBXL16 CCDC78 STUB1 LOC101929280 MCRIP2 METRN NARFL
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication RHOT2 GNG13 LOC105371184 WDR90 WFIKKN1 CHTF18 WDR24 HAGHL PIGQ JMJD8 METTL26 CCDC78 STUB1 MCRIP2 NARFL FAM173A LOC100287175 RHBDL1 LOC105371038 MSLN RAB40C FBXL16 RPUSD1 LOC101929280 METRN MIR662
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication RHOT2 GNG13 LOC105371184 WDR90 WFIKKN1 CHTF18 WDR24 HAGHL PIGQ JMJD8 METTL26 CCDC78 STUB1 MCRIP2 LOC107987233 NARFL MIR3176 FAM173A LOC100287175 RAB11FIP3 NHLRC4 LINC00235 RHBDL1 PRR35 LOC105371038 MSLN RAB40C FBXL16 RPUSD1 LOC101929280 METRN CAPN15 PRR25 MIR5587 MIR662
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss RHOT2 FAM173A LOC100287175 LOC105371184 WDR90 WFIKKN1 WDR24 RHBDL1 HAGHL JMJD8 LOC105371038 METTL26 RAB40C FBXL16 CCDC78 STUB1 MCRIP2 METRN NARFL
nsv571022 Chr.16:718334 - 728820 on Build GRCh38 Loss FAM173A CCDC78 METRN HAGHL
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain RHOT2 FAM173A LOC100287175 LOC105371184 WDR90 WFIKKN1 WDR24 RHBDL1 HAGHL JMJD8 LOC105371038 METTL26 FBXL16 CCDC78 STUB1 MCRIP2 METRN NARFL
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss RHOT2 FAM173A LOC105371184 WDR90 WDR24 RHBDL1 HAGHL JMJD8 MSLN FBXL16 CCDC78 STUB1 METRN NARFL
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss RHOT2 FAM173A LOC100287175 GNG13 LOC105371184 WDR90 CHTF18 WDR24 RHBDL1 HAGHL JMJD8 LOC105371038 MSLN FBXL16 CCDC78 RPUSD1 STUB1 MCRIP2 METRN NARFL MIR662

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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