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See other PIGQ CNV Assays ›
Gene Symbol
PIGQ
Assay Reference Genome
Location

Chr.16:579152 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01134178_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9091

Gene Name:

 phosphatidylinositol glycan anchor biosynthesis class Q

Gene Aliases:

 GPI1, c407A10.1

Location:

 Chr.16:569968-584136 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 7 - Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIGQ NM_004204.3 NP_004195.2
NM_148920.2 NP_683721.1
AB003723.1 BAA24948.1
AF030177.1 AAC32661.1
AK055163.1
AK300297.1
AK314361.1
BC006377.2 AAH06377.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833113 Chr.16:506513 - 628160 on Build GRCh38 Loss LINC00235 NHLRC4 MIR5587 PRR35 RAB40C MIR3176 PIGQ LOC107987233 LOC101929280 RAB11FIP3 CAPN15
esv3637579 Chr.16:574322 - 585512 on Build GRCh38 Loss PIGQ
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TPSAB1 ARHGDIG LINC00235 BRICD5 SNORA64 TSR3 SNHG19 MSLN PTX4 HBZ CAPN15 C1QTNF8 TELO2 WFIKKN1 MIR3180-5 PDIA2 JMJD8 MIR5587 TPSD1 ECI1 MRPL28 TRAF7 LINC00254 ABCA3 PIGQ MRPS34 MAPK8IP3 UBE2I LOC107984876 NOXO1 LUC7L CRAMP1 SLC9A3R2 FBXL16 RNPS1 MIR3677 WASIR2 HBQ1 RHBDL1 SPSB3 MIR3176 NTN3 C16orf59 NUBP2 RPUSD1 GNG13 CCDC78 DDX11L10 MIR662 RNF151 MSRB1 AMDHD2 RAB26 MIR6767 NPW IGFALS RHOT2 TSC2 GNPTG SOX8 NHLRC4 FLJ42627 HBA2 LOC105371049 TMEM8A LOC107987233 MIR6859-4 TPSG1 RPL3L LOC652276 MEIOB FAHD1 METTL26 EME2 MIR4516 HS3ST6 NPRL3 DNASE1L2 LOC101929280 LOC105371038 LMF1 C16orf91 UNKL PGP TBC1D24 HN1L RGS11 CCNF MIR6768 SYNGR3 FAM173A NARFL PRSS29P SSTR5 MPG LOC729652 SSTR5-AS1 MIR940 GFER LOC106660606 LOC105371046 SNORA10 ABCA17P PDPK1 HAGH LOC105371184 METRN RPL23AP5 NDUFB10 PRSS27 POLR3K MIR4717 CACNA1H ATP6V0C CCDC154 ZNF598 TPSB2 MIR3177 WDR90 CHTF18 MCRIP2 MLST8 CEMP1 HAGHL MIR6511B1 RAB40C IFT140 RPS2 NME3 MIR1225 HBM CLCN7 LMF1-AS1 KCTD5 PKD1 DECR2 PRR25 NTHL1 LOC105371045 STUB1 HBA1 SNRNP25 RHBDF1 SNHG9 BAIAP3 SNORA78 AXIN1 LOC100287175 PRR35 FAM234A LOC105371047 RAB11FIP3 TBL3 NME4 CASKIN1 MIR3178 WDR24 LOC100134368 SNORD60 E4F1 TMEM204 ERVK13-1
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss LINC00235 MSLN CAPN15 RHOT2 LOC105371184 WFIKKN1 NHLRC4 JMJD8 MIR5587 PRR25 METRN STUB1 PIGQ LOC107987233 FBXL16 METTL26 LOC100287175 PRR35 LOC101929280 WDR90 RAB11FIP3 LOC105371038 WDR24 CHTF18 MCRIP2 RHBDL1 HAGHL RAB40C MIR3176 FAM173A NARFL RPUSD1 GNG13 CCDC78 MIR662
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss LINC00235 MSLN CAPN15 RHOT2 LOC105371184 WFIKKN1 NHLRC4 JMJD8 MIR5587 PRR25 METRN STUB1 PIGQ LOC107987233 FBXL16 METTL26 LOC100287175 PRR35 LOC101929280 WDR90 RAB11FIP3 LOC105371038 WDR24 CHTF18 MCRIP2 RHBDL1 HAGHL RAB40C MIR3176 FAM173A NARFL RPUSD1 GNG13 CCDC78 MIR662
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LINC00235 SSTR5-AS1 MSLN LMF1-AS1 CAPN15 RHOT2 C1QTNF8 SOX8 LOC105371184 WFIKKN1 NHLRC4 JMJD8 MIR5587 PRR25 METRN STUB1 PIGQ LOC107987233 LOC107984876 FBXL16 METTL26 LOC100287175 PRR35 LOC101929280 WDR90 RAB11FIP3 LOC105371038 LMF1 WDR24 CHTF18 MCRIP2 RHBDL1 HAGHL RAB40C MIR3176 FAM173A NARFL RPUSD1 GNG13 CCDC78 SSTR5 MIR662
dgv4823n54 Chr.16:562698 - 662867 on Build GRCh38 Loss MCRIP2 WFIKKN1 NHLRC4 METTL26 LOC100287175 PRR35 RAB40C PIGQ LOC107987233 LOC101929280 WDR90 LOC105371038
nsv457304 Chr.16:554554 - 611142 on Build GRCh38 Gain NHLRC4 PRR35 RAB40C PIGQ LOC107987233 LOC101929280 CAPN15
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication LINC00235 MSLN CAPN15 RHOT2 LOC105371184 WFIKKN1 NHLRC4 JMJD8 MIR5587 PRR25 METRN STUB1 PIGQ LOC107987233 FBXL16 METTL26 LOC100287175 PRR35 LOC101929280 WDR90 RAB11FIP3 LOC105371038 WDR24 CHTF18 MCRIP2 RHBDL1 HAGHL RAB40C MIR3176 FAM173A NARFL RPUSD1 GNG13 CCDC78 MIR662

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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