Hs01146615_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63195585 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3	5	3097	NP_060268.2
	AB055518.1	2	2438	BAB62751.1
	AK000398.1	3	2258	BAA91138.1
	AK024546.1	1	610
	AK095795.1	5	2815
	AL834366.1	2	2218	CAD39029.1
	BC003681.1	4	2771	AAH03681.1
	BC016920.2	2	2514	AAH16920.2
	BC050284.1	5	3097	AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	BIRC7 MIR3196 YTHDF1 LOC107985425 NKAIN4 MIR124-3
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	COL20A1 FLJ16779 BIRC7 MIR3196 HELZ2 YTHDF1 KCNQ2 LOC100130587 EEF1A2 CHRNA4 LOC107985425 NKAIN4 PPDPF LOC102723788 PTK6 SRMS LOC100130152 FNDC11 ARFGAP1 MIR4326 MIR124-3
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	LOC63930 YTHDF1 HAR1B HAR1A MIR124-3
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	BIRC7 MIR3196 YTHDF1 LOC107985425 NKAIN4
nsv828798	Chr.20:63194266 - 63202129 on Build GRCh38	Loss	YTHDF1
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	MIR3196 HELZ2 YTHDF1 LOC100130587 LOC107985425 GMEB2 NKAIN4 PPDPF OGFR TCFL5 SRMS FNDC11 DIDO1 OGFR-AS1 DPH3P1 MIR4326 MIR124-3 LOC63930 COL20A1 FLJ16779 BIRC7 LINC01056 GID8 KCNQ2 COL9A3 LOC107985428 HAR1B EEF1A2 CHRNA4 MRGBP LOC102723788 HAR1A PTK6 LOC100130152 LINC00659 ARFGAP1 LINC00029 BHLHE23 SLC17A9
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	BIRC7 MIR3196 YTHDF1 LOC107985425 NKAIN4 MIR124-3
esv2722892	Chr.20:63194513 - 63197931 on Build GRCh38	Deletion	YTHDF1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding