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See other PCOLCE CNV Assays ›
Gene Symbol
PCOLCE
Assay Reference Genome
Location

Chr.7:100606454 on build GRCh38
Cytoband
7q22.1
Assay ID Hs01164965_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5118

Gene Name:

 procollagen C-endopeptidase enhancer

Gene Aliases:

 PCPE, PCPE-1, PCPE1

Location:

 Chr.7:100602259-100608175 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCOLCE NM_002593.3 6 962 NP_002584.2
AB008549.1 6 820 BAA23281.1
AK313748.1 6 858
BC000574.2 6 855 AAH00574.1
BC033205.1 6 800 AAH33205.1
L33799.1 6 824 AAA61949.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2734888 Chr.7:99975623 - 101290285 on Build GRCh38 Deletion MIR93 MIR4658 STAG3L5P-PVRIG2P-PILRB ZCWPW1 ZNF3 GAL3ST4 ACHE PMS2P1 ZKSCAN1 VGF LOC102724094 STAG3 PILRA MIR106B ACTL6B AZGP1P1 POP7 MUC3A PVRIG EPO PCOLCE-AS1 LRCH4 STAG3L5P SPDYE3 MEPCE TFR2 PILRB COPS6 ZASP MIR6875 LOC105375429 TRIM56 ZNHIT1 AP1S1 MOSPD3 NYAP1 PPP1R35 GATS ZSCAN21 SERPINE1 LAMTOR4 NAT16 MIR6840 FBXO24 UFSP1 C7orf43 MIR4653 FIS1 CLDN15 SAP25 C7orf61 AZGP1 MUC17 TRIP6 TAF6 PVRIG2P ZAN AGFG2 MOGAT3 GPC2 EPHB4 MCM7 MIR25 GIGYF1 PCOLCE PLOD3 AP4M1 GNB2 SRRT MUC12 TSC22D4 SLC12A9 MBLAC1 CNPY4
nsv951386 Chr.7:100566478 - 100682977 on Build GRCh38 Deletion SAP25 PCOLCE-AS1 LRCH4 TFR2 ZASP AGFG2 LOC105375429 GIGYF1 PCOLCE FBXO24 GNB2 MOSPD3 ACTL6B
nsv831072 Chr.7:100564880 - 100765212 on Build GRCh38 Loss SAP25 EPO PCOLCE-AS1 LRCH4 ZAN TFR2 ZASP AGFG2 LOC105375429 GIGYF1 PCOLCE FBXO24 GNB2 MOSPD3 ACTL6B POP7
nsv5868 Chr.7:100572375 - 100617023 on Build GRCh38 Deletion SAP25 PCOLCE FBXO24 PCOLCE-AS1 MOSPD3 LRCH4 ZASP

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)


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