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See other GNPTG CNV Assays ›
Gene Symbol
GNPTG
Assay Reference Genome
Location

Chr.16:1362487 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01167710_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84572

Gene Name:

 N-acetylglucosamine-1-phosphate transferase gamma subunit

Gene Aliases:

 C16orf27, GNPTAG, LP2537, RJD9

Location:

 Chr.16:1351899-1363351 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
XM_017023783.1 XP_016879272.1
AF302786.1 AAG27706.1
AK126110.1 3 1709
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
BX398427.1
CD671181.1
DT219524.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain TELO2 UBE2I TSR3 PTX4 UNKL CLCN7 IFT140 GNPTG LOC105371045 C16orf91 BAIAP3 CCDC154
dgv473e214 Chr.16:1356674 - 1364974 on Build GRCh38 Loss UNKL GNPTG
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TMEM204 RPL23AP5 SNORA78 HAGH C1QTNF8 LOC100134368 NPW SLC9A3R2 MIR3677 GNPTG POLR3K TPSAB1 BAIAP3 LINC00235 CRAMP1 LOC105371047 EME2 FAHD1 LMF1-AS1 HBQ1 LOC107987233 MIR1225 LOC105371046 ABCA17P ECI1 MIR4717 RHBDF1 SNRNP25 TBL3 SNORA10 LOC105371049 SNHG9 SNORD60 IFT140 KCTD5 MAPK8IP3 RHOT2 TELO2 LOC101929280 RGS11 PKD1 NTHL1 MIR6768 CCDC78 TPSG1 LOC105371184 MLST8 SNHG19 TMEM8A SOX8 ATP6V0C CASKIN1 MIR6767 GFER MIR3180-5 AXIN1 NME4 MIR940 METRN FBXL16 NME3 LOC729652 PIGQ LOC652276 NTN3 CCNF LOC105371038 ZNF598 NOXO1 RPUSD1 PRSS27 FAM173A SSTR5 TPSB2 MIR3178 CLCN7 MIR3177 MCRIP2 WASIR2 MIR6511B1 MIR3176 LMF1 RAB26 GNG13 TPSD1 SSTR5-AS1 UNKL NPRL3 RAB40C DECR2 LOC107984876 NDUFB10 RNPS1 LOC106660606 TRAF7 MRPL28 CEMP1 MSRB1 PRSS29P STUB1 TSC2 PDPK1 RNF151 UBE2I E4F1 PRR35 PTX4 IGFALS MEIOB HBZ CACNA1H MRPS34 ARHGDIG HBA1 HBM SYNGR3 WDR90 CHTF18 C16orf91 ABCA3 FLJ42627 WDR24 LUC7L AMDHD2 PDIA2 HBA2 FAM234A DNASE1L2 PRR25 RPL3L MIR662 CCDC154 RAB11FIP3 HS3ST6 TSR3 JMJD8 MIR5587 MSLN RPS2 TBC1D24 DDX11L10 SNORA64 RHBDL1 CAPN15 NARFL MIR6859-4 METTL26 LOC105371045 NUBP2 MPG SPSB3 WFIKKN1 BRICD5 LOC100287175 C16orf59 MIR4516 LINC00254 NHLRC4 HAGHL HN1L PGP ERVK13-1
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss SSTR5-AS1 UBE2I SSTR5 UNKL TPSB2 SOX8 C1QTNF8 CLCN7 GNPTG CACNA1H TPSAB1 LOC107984876 BAIAP3 CCDC154 LMF1-AS1 TSR3 LMF1 PRSS29P TPSG1 LOC105371045 TPSD1 C16orf91
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain SSTR5-AS1 UBE2I SSTR5 UNKL TPSB2 C1QTNF8 GNPTG CACNA1H TPSAB1 BAIAP3 TSR3 PRSS29P TPSG1 TPSD1
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss SSTR5-AS1 UBE2I SSTR5 UNKL TPSB2 SOX8 C1QTNF8 GNPTG CACNA1H TPSAB1 BAIAP3 LMF1-AS1 TSR3 LMF1 PRSS29P TPSG1 TPSD1
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion UBE2I TMEM204 PTX4 UNKL TPSB2 CLCN7 IFT140 GNPTG CACNA1H TPSAB1 BAIAP3 CCDC154 LOC105371047 TELO2 TSR3 PRSS29P TPSG1 LOC105371045 TPSD1 C16orf91
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss UBE2I TSR3 UNKL PRSS29P GNPTG TPSD1 TPSAB1 C16orf91 BAIAP3
esv3637616 Chr.16:1356693 - 1364925 on Build GRCh38 Gain UNKL GNPTG

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