Hs01195236_cn

• Gene Symbol: COPS6
• Assay Reference Genome Location: Chr.7:100090462 on build GRCh38
• Cytoband: 7q22.1

Target Gene Details

• Entrez Gene ID: 10980
• Gene Name: COP9 signalosome subunit 6
• Gene Aliases: CSN6, MOV34-34KD
• Location: Chr.7:100088960-100092200 on Build GRCh38
• Assay Gene Location: Overlaps Exon 4 - Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
COPS6	NM_006833.4			NP_006824.2
	AK312024.1
	BC002520.2			AAH02520.2
	BI113801.1
	CB990467.1
	U70735.1			AAD03469.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv607931	Chr.7:100067194 - 100198523 on Build GRCh38	Loss	ZNF3 MIR25 COPS6 STAG3 GATS MCM7 MIR4658 TAF6 MIR93 MBLAC1 GPC2 LAMTOR4 GAL3ST4 AP4M1 C7orf43 MIR106B CNPY4
nsv469687	Chr.7:99974920 - 100157518 on Build GRCh38	Loss	ZNF3 MIR25 COPS6 ZSCAN21 AZGP1P1 MCM7 MIR4658 TAF6 AZGP1 MIR93 ZKSCAN1 MBLAC1 LAMTOR4 AP4M1 C7orf43 MIR106B CNPY4
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	POP7 NYAP1 SRRT PMS2P1 ACHE FIS1 AGFG2 LOC102724094 SLC12A9 MIR4658 SPDYE3 TAF6 ZKSCAN1 MUC12 TFR2 ZAN ZSCAN21 PPP1R35 TRIM56 TSC22D4 FBXO24 GIGYF1 GPC2 MIR6875 PVRIG2P TRIP6 STAG3L5P PVRIG MUC17 GNB2 MOSPD3 PLOD3 ZNF3 LOC105375429 AP1S1 MOGAT3 PILRB CLDN15 STAG3 STAG3L5P-PVRIG2P-PILRB MIR6840 VGF SERPINE1 AZGP1 ACTL6B MBLAC1 MIR4653 SAP25 LAMTOR4 GAL3ST4 NAT16 EPHB4 MIR106B PCOLCE-AS1 ZNHIT1 MIR25 COPS6 PILRA AZGP1P1 GATS EPO MCM7 MIR93 PCOLCE C7orf61 ZCWPW1 ZASP UFSP1 MEPCE AP4M1 C7orf43 MUC3A CNPY4 LRCH4

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Process(es)

nucleotide-excision repair, DNA damage recognition
transcription-coupled nucleotide-excision repair
cullin deneddylation
viral process

Function(s)

protein binding