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See other HAGHL CNV Assays ›
Gene Symbol
HAGHL
Assay Reference Genome
Location

Chr.16:729016 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01199401_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84264

Gene Name:

 hydroxyacylglutathione hydrolase-like

Gene Aliases:

 -

Location:

 Chr.16:726936-729746 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HAGHL NM_001290137.1 NP_001277066.1
NM_001290139.1 NP_001277068.1
NM_001323635.1 NP_001310564.1
NM_001323636.1 NP_001310565.1
NM_032304.3 NP_115680.1
XM_005255631.4 7 961 XP_005255688.1
XM_005255632.1 XP_005255689.1
XM_011522711.1 7 889 XP_011521013.1
XM_011522712.1 XP_011521014.1
XM_017023773.1 7 849 XP_016879262.1
XM_017023774.1 XP_016879263.1
AA489499.1
AK054841.1 6 968 BAB70814.1
AK098340.1
AK293575.1
BC004353.1 AAH04353.1
BC015008.1 AAH15008.1
BC033796.1 7 1002 AAH33796.1
BG821643.1
BI333301.1
BI834617.1
BQ067068.1
CD050886.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss WFIKKN1 METTL26 MCRIP2 RHOT2 CCDC78 RHBDL1 FAM173A LOC105371184 WDR90 FBXL16 WDR24 LOC105371038 RAB40C JMJD8 NARFL HAGHL STUB1 LOC100287175 METRN
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain WFIKKN1 METTL26 MCRIP2 RHOT2 CCDC78 RHBDL1 FAM173A LOC105371184 WDR90 FBXL16 WDR24 LOC105371038 JMJD8 NARFL HAGHL STUB1 LOC100287175 METRN
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NUBP2 NME3 RHOT2 CASKIN1 MIR3177 SNORD60 TRAF7 HBA1 LOC100134368 LOC105371184 TBC1D24 HAGH AXIN1 LOC105371038 FAHD1 CLCN7 TPSD1 MSRB1 SYNGR3 FAM234A MIR6768 ATP6V0C CAPN15 PDIA2 MIR940 HN1L NPW FBXL16 PKD1 MLST8 JMJD8 BRICD5 E4F1 LINC00254 SPSB3 UBE2I ECI1 BAIAP3 SNRNP25 MSLN ABCA3 LOC107984876 RNF151 LMF1-AS1 MIR3180-5 MEIOB DECR2 POLR3K LUC7L RAB40C SNHG9 MRPS34 MIR5587 PRR35 SNHG19 ABCA17P RHBDF1 MPG SNORA64 HS3ST6 NPRL3 LOC107987233 RHBDL1 TSC2 SNORA10 TPSB2 SOX8 TPSAB1 WDR90 LOC105371047 WDR24 NTHL1 NHLRC4 KCTD5 NARFL RAB11FIP3 STUB1 MIR3178 RNPS1 CCNF MIR6511B1 ERVK13-1 TSR3 LOC729652 METTL26 DNASE1L2 MCRIP2 TMEM8A HBQ1 LOC105371046 SNORA78 RPUSD1 SSTR5 GFER HAGHL ZNF598 ARHGDIG FLJ42627 CACNA1H NTN3 PRSS29P DDX11L10 WFIKKN1 RPS2 EME2 LMF1 LOC101929280 CEMP1 LOC105371049 GNPTG IFT140 LOC652276 SLC9A3R2 MIR3176 NOXO1 TELO2 MAPK8IP3 RPL3L PTX4 WASIR2 MRPL28 PRR25 LOC100287175 LOC105371045 RGS11 TMEM204 MIR4717 C16orf91 MIR6859-4 MIR662 CRAMP1 TBL3 PIGQ HBM HBZ SSTR5-AS1 TPSG1 MIR3677 CCDC78 MIR1225 PDPK1 FAM173A RPL23AP5 MIR6767 NME4 PRSS27 C16orf59 UNKL PGP CCDC154 AMDHD2 LINC00235 LOC106660606 RAB26 HBA2 MIR4516 GNG13 NDUFB10 C1QTNF8 METRN CHTF18 IGFALS
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss RHOT2 CCDC78 RHBDL1 FAM173A LOC105371184 WDR90 FBXL16 WDR24 JMJD8 NARFL HAGHL STUB1 METRN MSLN
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss MCRIP2 RHOT2 CCDC78 RHBDL1 FAM173A LOC105371184 RPUSD1 WDR90 FBXL16 WDR24 LOC105371038 JMJD8 NARFL HAGHL STUB1 LOC100287175 GNG13 METRN CHTF18 MSLN MIR662
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss METTL26 MCRIP2 RHOT2 MIR3176 LOC105371184 RPUSD1 LOC105371038 RAB40C HAGHL PRR25 MIR5587 PRR35 LOC100287175 MIR662 PIGQ WFIKKN1 CAPN15 LOC101929280 LOC107987233 CCDC78 RHBDL1 FAM173A WDR90 FBXL16 WDR24 JMJD8 NHLRC4 NARFL RAB11FIP3 STUB1 LINC00235 GNG13 METRN CHTF18 MSLN
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss FBXL16 WDR24 JMJD8 NARFL HAGHL STUB1 CCDC78 METRN MSLN FAM173A
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss METTL26 MCRIP2 RHOT2 MIR3176 LOC105371184 RPUSD1 LOC105371038 RAB40C HAGHL PRR25 MIR5587 PRR35 LOC100287175 MIR662 PIGQ WFIKKN1 CAPN15 LOC101929280 LOC107987233 CCDC78 RHBDL1 FAM173A WDR90 FBXL16 WDR24 JMJD8 NHLRC4 NARFL RAB11FIP3 STUB1 LINC00235 GNG13 METRN CHTF18 MSLN
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion METTL26 MCRIP2 RHOT2 MIR3176 LOC105371184 RPUSD1 SSTR5 LOC105371038 RAB40C HAGHL PRR25 MIR5587 PRR35 LOC100287175 MIR662 PIGQ WFIKKN1 SSTR5-AS1 LMF1 CAPN15 LOC101929280 LOC107987233 CCDC78 RHBDL1 FAM173A SOX8 WDR90 FBXL16 WDR24 JMJD8 NHLRC4 NARFL RAB11FIP3 STUB1 LINC00235 GNG13 C1QTNF8 METRN CHTF18 MSLN LOC107984876 LMF1-AS1
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss PIGQ WFIKKN1 METTL26 MCRIP2 LOC101929280 RHOT2 CCDC78 RHBDL1 FAM173A LOC105371184 WDR90 FBXL16 WDR24 LOC105371038 RAB40C JMJD8 NARFL HAGHL STUB1 LOC100287175 METRN
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication METTL26 MCRIP2 RHOT2 LOC105371184 RPUSD1 LOC105371038 RAB40C HAGHL LOC100287175 MIR662 PIGQ WFIKKN1 LOC101929280 CCDC78 RHBDL1 FAM173A WDR90 FBXL16 WDR24 JMJD8 NARFL STUB1 GNG13 METRN CHTF18 MSLN
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication METTL26 MCRIP2 RHOT2 MIR3176 LOC105371184 RPUSD1 LOC105371038 RAB40C HAGHL PRR25 MIR5587 PRR35 LOC100287175 MIR662 PIGQ WFIKKN1 CAPN15 LOC101929280 LOC107987233 CCDC78 RHBDL1 FAM173A WDR90 FBXL16 WDR24 JMJD8 NHLRC4 NARFL RAB11FIP3 STUB1 LINC00235 GNG13 METRN CHTF18 MSLN

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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